RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 OR5J2Q8NH18 312 aa12.4□□□□□ -0.43
SYNGAP1-204ENST00000449372 NDC1Q9BTX1 674 aa12.4□□□□□ -0.43
SYNGAP1-204ENST00000449372 TOLLIPQ9H0E2 274 aa12.4□□□□□ -0.43
SYNGAP1-204ENST00000449372 PCYT1BQ9Y5K3 369 aaPredicted RBP12.4□□□□□ -0.43
SYNGAP1-204ENST00000449372 ARL6IP5O75915 188 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 ADCK2Q7Z695 626 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 ZNF614Q8N883 585 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 ZNF383Q8NA42 475 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 OR4F15Q8NGB8 312 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 SMIM4Q8WVI0 70 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 CMTM3Q96MX0 182 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 RAB11FIP5Q9BXF6 653 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 FAM117AQ9C073 453 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 RHBGQ9H310 441 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 TMEM185BQ9H7F4 350 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 LAMP5Q9UJQ1 280 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 GPR34Q9UPC5 381 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 OR6C76A6NM76 312 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 HTR1FP30939 366 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 ILF3Q12906 894 aaKnown RBP eCLIP12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 RBM39Q14498 530 aaKnown RBP12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 C2orf68Q2NKX9 166 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 CNTNAP3BQ96NU0 1288 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 FCRL4Q96PJ5 515 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 GDE1Q9NZC3 331 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 DEC1Q9P2X7 70 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 DAPL1A0PJW8 107 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 GOSR2O14653 212 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 IMPA2O14732 288 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 NDUFS4O43181 175 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 EDN3P14138 238 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 ITGA3P26006 1051 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 ENPP2Q13822 863 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 COTL1Q14019 142 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 IRF4Q15306 451 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 TANGO2Q6ICL3 276 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 ERN2Q76MJ5 926 aaKnown RBP12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 KLHL31Q9H511 634 aa12.39□□□□□ -0.43
SYNGAP1-204ENST00000449372 TRAPPC13A5PLN9 417 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 URADA6NGE7 173 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 RNF13O43567 381 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 OR2T1O43869 369 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 TMEM127O75204 238 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 ANXA2P07355 339 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 UCHL1P09936 223 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 C6P13671 934 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 CSNK2A2P19784 350 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 ACTC1P68032 377 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 ACTA1P68133 377 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 SRSF3P84103 164 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 GAS6Q14393 721 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 SLC9A5Q14940 896 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 HEPHL1Q6MZM0 1159 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 C11orf88Q6PI97 169 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 POGLUT1Q8NBL1 392 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 HAVCR2Q8TDQ0 301 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 SMAP2Q8WU79 429 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 COX14Q96I36 57 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 TGIF2Q9GZN2 237 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 CAMK2AQ9UQM7 478 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 KANTRA0A1W2PQU2 76 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 NAP1L6A6NFF2 107 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 EPOPA6NHQ4 379 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 GSTZ1O43708 216 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 RCBTB2O95199 551 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 SERPIND1P05546 499 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 NDUFV2P19404 249 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 VAMP1P23763 118 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 PBX2P40425 430 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 NCBP2P52298 156 aaKnown RBP eCLIP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 RAB4BP61018 213 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 CLINT1Q14677 625 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 LINGO2Q7L985 606 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 REC114Q7Z4M0 266 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 ZNF546Q86UE3 836 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 RANBP3LQ86VV4 465 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 GPR32P1Q8NGA4 272 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 OR8D1Q8WZ84 308 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 ZNF75AQ96N20 296 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 JAM3Q9BX67 310 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 HDAC8Q9BY41 377 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 PLA2G2FQ9BZM2 168 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 MTIF3Q9H2K0 278 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 SMCO4Q9NRQ5 59 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 SLC22A31A6NKX4 558 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 ZNF705EA8MWA4 302 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 ACTL6AO96019 429 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 IFNGP01579 166 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 IGHV2-5P01817 119 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 IL5P05113 134 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 ALPPL2P10696 532 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 SNRPBP14678 240 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 UBE2MP61081 183 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 ELFN2Q5R3F8 820 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 DCAF12L2Q5VW00 463 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 SMARCD3Q6STE5 483 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 S100PBPQ96BU1 408 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 TM4SF18Q96CE8 201 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 NAA11Q9BSU3 229 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms