RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 KATNB1Q9BVA0 655 aa24.61■■□□□ 1.53
CBX4-202ENST00000448310 RSPO3Q9BXY4 272 aaPredicted RBP24.61■■□□□ 1.53
CBX4-202ENST00000448310 BCL2L10Q9HD36 194 aa24.61■■□□□ 1.53
CBX4-202ENST00000448310 A4GALTQ9NPC4 353 aa24.61■■□□□ 1.53
CBX4-202ENST00000448310 CA10Q9NS85 328 aa24.61■■□□□ 1.53
CBX4-202ENST00000448310 CDC42EP3Q9UKI2 254 aa24.61■■□□□ 1.53
CBX4-202ENST00000448310 FKBP7Q9Y680 259 aa24.61■■□□□ 1.53
CBX4-202ENST00000448310 ARPC4-TTLL3A0A0A6YYG9 625 aa24.6■■□□□ 1.53
CBX4-202ENST00000448310 CRYAAP02489 173 aa24.6■■□□□ 1.53
CBX4-202ENST00000448310 CECR9P0C854 216 aa24.6■■□□□ 1.53
CBX4-202ENST00000448310 GTF2E2P29084 291 aaKnown RBP24.6■■□□□ 1.53
CBX4-202ENST00000448310 SERPINF1P36955 418 aa24.6■■□□□ 1.53
CBX4-202ENST00000448310 PDLIM4P50479 330 aa24.6■■□□□ 1.53
CBX4-202ENST00000448310 SLC18A1P54219 525 aa24.6■■□□□ 1.53
CBX4-202ENST00000448310 LSM11P83369 360 aaKnown RBP eCLIP24.6■■□□□ 1.531e-6■■■■■ 28.9
CBX4-202ENST00000448310 NAAAQ02083 359 aa24.6■■□□□ 1.53
CBX4-202ENST00000448310 GGTLC2Q14390 218 aa24.6■■□□□ 1.53
CBX4-202ENST00000448310 ANKRD16Q6P6B7 361 aa24.6■■□□□ 1.53
CBX4-202ENST00000448310 BBS10Q8TAM1 723 aa24.6■■□□□ 1.53
CBX4-202ENST00000448310 VRK1Q99986 396 aaPredicted RBP24.6■■□□□ 1.53
CBX4-202ENST00000448310 LINC00470Q9BZP3 86 aa24.6■■□□□ 1.53
CBX4-202ENST00000448310 OR6C65A6NJZ3 312 aa24.59■■□□□ 1.53
CBX4-202ENST00000448310 HOXB9P17482 250 aaPredicted RBP24.59■■□□□ 1.53
CBX4-202ENST00000448310 CALCRP30988 508 aa24.59■■□□□ 1.53
CBX4-202ENST00000448310 CARTPTQ16568 116 aa24.59■■□□□ 1.53
CBX4-202ENST00000448310 SLC46A3Q7Z3Q1 461 aa24.59■■□□□ 1.53
CBX4-202ENST00000448310 ARIH2OSQ8N7S6 290 aa24.59■■□□□ 1.53
CBX4-202ENST00000448310 BEX2Q9BXY8 128 aa24.59■■□□□ 1.53
CBX4-202ENST00000448310 B3GAT1Q9P2W7 334 aa24.59■■□□□ 1.53
CBX4-202ENST00000448310 CRNNQ9UBG3 495 aaPredicted RBP24.59■■□□□ 1.53
CBX4-202ENST00000448310 RPS6KB2Q9UBS0 482 aa24.59■■□□□ 1.53
CBX4-202ENST00000448310 USH1CQ9Y6N9 552 aa24.59■■□□□ 1.53
CBX4-202ENST00000448310 VWC2LB2RUY7 222 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 C5orf58C9J3I9 102 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 CELA3BP08861 270 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 OR4A8P0C604 315 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 BMP2P12643 396 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 ZNF43P17038 809 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 ARF1P84077 181 aaKnown RBP24.58■■□□□ 1.53
CBX4-202ENST00000448310 ADIPOQQ15848 244 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 MYPOPQ86VE0 399 aaPredicted RBP24.58■■□□□ 1.53
CBX4-202ENST00000448310 COMTD1Q86VU5 262 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 MAGEE2Q8TD90 523 aaPredicted RBP24.58■■□□□ 1.53
CBX4-202ENST00000448310 TLCD1Q96CP7 247 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 PRR14Q9BWN1 585 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 RAD21L1Q9H4I0 556 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 SLC25A37Q9NYZ2 338 aa24.58■■□□□ 1.53
CBX4-202ENST00000448310 PHF1O43189 567 aaPredicted RBP24.57■■□□□ 1.52
CBX4-202ENST00000448310 ZNF500O60304 480 aaPredicted RBP24.57■■□□□ 1.52
CBX4-202ENST00000448310 ZNF432O94892 652 aa24.57■■□□□ 1.52
CBX4-202ENST00000448310 HTR2AP28223 471 aa24.57■■□□□ 1.52
CBX4-202ENST00000448310 FADDQ13158 208 aa24.57■■□□□ 1.52
CBX4-202ENST00000448310 EPGNQ6UW88 154 aa24.57■■□□□ 1.52
CBX4-202ENST00000448310 C10orf111Q8N326 155 aa24.57■■□□□ 1.52
CBX4-202ENST00000448310 NFKBIDQ8NI38 313 aa24.57■■□□□ 1.52
CBX4-202ENST00000448310 TAAR8Q969N4 342 aa24.57■■□□□ 1.52
CBX4-202ENST00000448310 OXGR1Q96P68 337 aa24.57■■□□□ 1.52
CBX4-202ENST00000448310 PIMREGQ9BSJ6 248 aa24.57■■□□□ 1.52
CBX4-202ENST00000448310 TMEM160Q9NX00 188 aa24.57■■□□□ 1.52
CBX4-202ENST00000448310 RCE1Q9Y256 329 aa24.57■■□□□ 1.52
CBX4-202ENST00000448310 SVEP1Q4LDE5 3571 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 A0A1B0GWA3 101 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 M0R082 166 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 SLC43A1O75387 559 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 IGLV1-44P01699 117 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 CBLP22681 906 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 NR4A2P43354 598 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 SH3BGRP55822 239 aaPredicted RBP24.56■■□□□ 1.52
CBX4-202ENST00000448310 C6orf89Q6UWU4 347 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 MSRB3Q8IXL7 192 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 GOLGA6L1Q8N7Z2 621 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 ZNF417Q8TAU3 575 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 TMEM158Q8WZ71 300 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 SLC35B4Q969S0 331 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 ZNF837Q96EG3 531 aaPredicted RBP24.56■■□□□ 1.52
CBX4-202ENST00000448310 FOXN4Q96NZ1 517 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 ZNF317Q96PQ6 595 aaPredicted RBP24.56■■□□□ 1.52
CBX4-202ENST00000448310 ZNF587Q96SQ5 575 aaPredicted RBP24.56■■□□□ 1.52
CBX4-202ENST00000448310 TMBIM4Q9HC24 238 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 SLAMF8Q9P0V8 285 aa24.56■■□□□ 1.52
CBX4-202ENST00000448310 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP24.56■■□□□ 1.522e-8■■■■■ 39.6
CBX4-202ENST00000448310 IGKV1D-42A0A075B6H8 117 aa24.55■■□□□ 1.52
CBX4-202ENST00000448310 B9A039 149 aa24.55■■□□□ 1.52
CBX4-202ENST00000448310 LMX1BO60663 402 aa24.55■■□□□ 1.52
CBX4-202ENST00000448310 GRPRP30550 384 aa24.55■■□□□ 1.52
CBX4-202ENST00000448310 IL1RL1Q01638 556 aa24.55■■□□□ 1.52
CBX4-202ENST00000448310 C1DQ13901 141 aaKnown RBP24.55■■□□□ 1.52
CBX4-202ENST00000448310 SHARPINQ9H0F6 387 aa24.55■■□□□ 1.52
CBX4-202ENST00000448310 CHODLQ9H9P2 273 aa24.55■■□□□ 1.52
CBX4-202ENST00000448310 GPR35Q9HC97 309 aa24.55■■□□□ 1.52
CBX4-202ENST00000448310 IGHV4-61A0A0C4DH41 118 aa24.54■■□□□ 1.52
CBX4-202ENST00000448310 ZNF503-AS2A6NEH8 195 aa24.54■■□□□ 1.52
CBX4-202ENST00000448310 RPL36A-HNRNPH2H7BZ11 118 aa24.54■■□□□ 1.52
CBX4-202ENST00000448310 AIM2O14862 343 aa24.54■■□□□ 1.52
CBX4-202ENST00000448310 SEC14L2O76054 403 aa24.54■■□□□ 1.52
CBX4-202ENST00000448310 IGKV3-15P01624 115 aa24.54■■□□□ 1.52
CBX4-202ENST00000448310 ARAFP10398 606 aa24.54■■□□□ 1.52
CBX4-202ENST00000448310 ETS2P15036 469 aa24.54■■□□□ 1.52
CBX4-202ENST00000448310 PAX7P23759 505 aa24.54■■□□□ 1.52
CBX4-202ENST00000448310 IGFBP5P24593 272 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms