RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 OPN3Q9H1Y3 402 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-208ENST00000444533 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-208ENST00000444533 UPB1Q9UBR1 384 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 TESMINQ9Y4I5 508 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 NOX1Q9Y5S8 564 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 FLNCQ14315 2725 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF716A6NP11 495 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 BLOC1S5-TXNDC5H3BN57 136 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 FFAR1O14842 300 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 RNF13O43567 381 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 OR7A10O76100 309 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 DIRAS1O95057 198 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 LYPD3O95274 346 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 CNOT4O95628 575 aaKnown RBP12.53□□□□□ -0.4
SSBP3-208ENST00000444533 CLDN1O95832 211 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 SEMG1P04279 462 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 FUT1P19526 365 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 RRM2P31350 389 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 UGT2B15P54855 530 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 POU4F3Q15319 338 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 MBOAT2Q6ZWT7 520 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 AAED1Q7RTV5 226 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 PIWIL3Q7Z3Z3 882 aaKnown RBP12.53□□□□□ -0.4
SSBP3-208ENST00000444533 HDDC2Q7Z4H3 204 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 TSPYL5Q86VY4 417 aaPredicted RBP12.53□□□□□ -0.4
SSBP3-208ENST00000444533 C10orf67Q8IYJ2 551 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 LINC00471Q8N535 108 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF610Q8N9Z0 462 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 OR52J3Q8NH60 311 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 PFN4Q8NHR9 129 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 MOGAT1Q96PD6 335 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 HDHD5Q9BXW7 423 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 REEP1Q9H902 201 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 JKAMPQ9P055 326 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 NDRG3Q9UGV2 375 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 SLC7A8Q9UHI5 535 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 FLVCR1Q9Y5Y0 555 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 TENM4Q6N022 2769 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 MED12LQ86YW9 2145 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 LRRK2Q5S007 2527 aa12.53□□□□□ -0.4
SSBP3-208ENST00000444533 KIAA1549Q9HCM3 1950 aa12.52□□□□□ -0.4
SSBP3-208ENST00000444533 DOPEY1Q5JWR5 2465 aa12.52□□□□□ -0.4
SSBP3-208ENST00000444533 LOC102725191A0A1B0GVB3 256 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 TCRBV5S2A0A599 114 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 ZNF726A6NNF4 738 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 EFCAB9A8MZ26 197 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 C11orf98E9PRG8 122 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 PLPP3O14495 311 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 KLK2P20151 261 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 CD79BP40259 229 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 OR3A2P47893 321 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 SORDQ00796 357 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.41
SSBP3-208ENST00000444533 CDSNQ15517 529 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 ANKDD1AQ495B1 522 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 SP5Q6BEB4 398 aaPredicted RBP12.52□□□□□ -0.41
SSBP3-208ENST00000444533 PODNL1Q6PEZ8 512 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 TFAP2EQ6VUC0 442 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 MEX3BQ6ZN04 569 aaKnown RBP12.52□□□□□ -0.41
SSBP3-208ENST00000444533 CREB3L2Q70SY1 520 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 NUFIP2Q7Z417 695 aaKnown RBP12.52□□□□□ -0.41
SSBP3-208ENST00000444533 PXKQ7Z7A4 578 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 OAFQ86UD1 273 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 NRMQ8IXM6 262 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 POMGNT2Q8NAT1 580 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 ANKK1Q8NFD2 765 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 TMEM45BQ96B21 275 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 USB1Q9BQ65 265 aaKnown RBP12.52□□□□□ -0.41
SSBP3-208ENST00000444533 MEPEQ9NQ76 525 aaPredicted RBP12.52□□□□□ -0.41
SSBP3-208ENST00000444533 GALNT8Q9NY28 637 aa12.52□□□□□ -0.41
SSBP3-208ENST00000444533 USP9XQ93008 2570 aaPredicted RBP12.51□□□□□ -0.41
SSBP3-208ENST00000444533 A0A087WUU8 490 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 A0A1W2PRG6 482 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 TUBAL3A6NHL2 446 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 ZNF814B7Z6K7 855 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 MCIDASD6RGH6 385 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 C16orf97H3BN30 126 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 TNFRSF11BO00300 401 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 OR10H3O60404 316 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 RAMP1O60894 148 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 FZD7O75084 574 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 SLC43A1O75387 559 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 SERPINI2O75830 405 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 PRSS23O95084 383 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 CST1P01037 141 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 CGAP01215 116 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 ASAH2BP0C7U1 165 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 IL32P24001 234 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 SLC9A3P48764 834 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 PCYT1AP49585 367 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 ARHGDIAP52565 204 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 CLDN17P56750 224 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 POU3F1Q03052 451 aaPredicted RBP12.51□□□□□ -0.41
SSBP3-208ENST00000444533 TGFBR3Q03167 851 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 PRKCDQ05655 676 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 GK3PQ14409 553 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 P2RY6Q15077 328 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 NIPAL3Q6P499 406 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 Q6ZT83 130 aa12.51□□□□□ -0.41
SSBP3-208ENST00000444533 YTHDF3Q7Z739 585 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms