RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 MPP4Q96JB8 637 aa16.4■□□□□ 0.22
CCDC188-202ENST00000444532 ZNF587Q96SQ5 575 aaPredicted RBP16.4■□□□□ 0.22
CCDC188-202ENST00000444532 ASPNQ9BXN1 380 aa16.4■□□□□ 0.22
CCDC188-202ENST00000444532 AMBRA1Q9C0C7 1298 aa16.4■□□□□ 0.22
CCDC188-202ENST00000444532 BEX4Q9NWD9 120 aaPredicted RBP16.4■□□□□ 0.22
CCDC188-202ENST00000444532 SH3GLB1Q9Y371 365 aa16.4■□□□□ 0.22
CCDC188-202ENST00000444532 RAI1Q7Z5J4 1906 aaPredicted RBP16.4■□□□□ 0.22
CCDC188-202ENST00000444532 PRR14LQ5THK1 2151 aa16.4■□□□□ 0.22
CCDC188-202ENST00000444532 AKAP9Q99996 3911 aa16.39■□□□□ 0.22
CCDC188-202ENST00000444532 NDUFAB1O14561 156 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 MT-ATP6P00846 226 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 BGLAPP02818 100 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 CD3EP07766 207 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 PRDX6P30041 224 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 FOXG1P55316 489 aaPredicted RBP16.39■□□□□ 0.21
CCDC188-202ENST00000444532 GNGT1P63211 74 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 C8orf82Q6P1X6 216 aaPredicted RBP16.39■□□□□ 0.21
CCDC188-202ENST00000444532 TTC33Q6PID6 262 aaPredicted RBP16.39■□□□□ 0.21
CCDC188-202ENST00000444532 CARM1Q86X55 608 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 KDM8Q8N371 416 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 PIP5K1AQ99755 562 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 POLR2J2Q9GZM3 115 aaKnown RBP16.39■□□□□ 0.21
CCDC188-202ENST00000444532 POLR2J3Q9H1A7 115 aaKnown RBP16.39■□□□□ 0.21
CCDC188-202ENST00000444532 B3GAT1Q9P2W7 334 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 SEC14L4Q9UDX3 406 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 SLC7A7Q9UM01 511 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 RCE1Q9Y256 329 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 RNF115Q9Y4L5 304 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 CELSR1Q9NYQ6 3014 aa16.39■□□□□ 0.21
CCDC188-202ENST00000444532 MS4A18H0YCH9 400 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 KRT33AO76009 404 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 LYPD3O95274 346 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 PLAUP00749 431 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 THY1P04216 161 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 CBLP22681 906 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 SELENOPP49908 381 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 NUDT2P50583 147 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 LIPEQ05469 1076 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 LTBQ06643 244 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 C1DQ13901 141 aaKnown RBP16.38■□□□□ 0.21
CCDC188-202ENST00000444532 MS4A18Q3C1V0 323 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 CYBRD1Q53TN4 286 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 ADAM5Q6NVV9 412 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 NIPAL3Q6P499 406 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 C17orf78Q8N4C9 275 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 C10orf53Q8N6V4 93 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 BOD1Q96IK1 185 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 LINC00470Q9BZP3 86 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 SLC19A3Q9BZV2 496 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 MRPL39Q9NYK5 338 aaKnown RBP16.38■□□□□ 0.21
CCDC188-202ENST00000444532 SLC25A15Q9Y619 301 aa16.38■□□□□ 0.21
CCDC188-202ENST00000444532 DPRXA6NFQ7 191 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 NME4O00746 187 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 HS3ST1O14792 307 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 ZNF432O94892 652 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 NQO1P15559 274 aaKnown RBP16.37■□□□□ 0.21
CCDC188-202ENST00000444532 SLC7A2P52569 658 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 CLDN17P56750 224 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 SELENOWP63302 87 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 IL1RL1Q01638 556 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 BSPH1Q075Z2 132 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 PMS2P3Q13401 168 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 LRRC23Q53EV4 343 aaPredicted RBP16.37■□□□□ 0.21
CCDC188-202ENST00000444532 C9orf135Q5VTT2 229 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 WDR88Q6ZMY6 472 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 TSPYL5Q86VY4 417 aaPredicted RBP16.37■□□□□ 0.21
CCDC188-202ENST00000444532 MOGAT1Q96PD6 335 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 ZNF426Q9BUY5 554 aa16.37■□□□□ 0.21
CCDC188-202ENST00000444532 MAP1AP78559 2803 aaPredicted RBP16.37■□□□□ 0.21
CCDC188-202ENST00000444532 DSCAMO60469 2012 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 HIVEP1P15822 2718 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 ZNF587BE7ETH6 402 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 AKAP8O43823 692 aaKnown RBP16.36■□□□□ 0.21
CCDC188-202ENST00000444532 PTNP21246 168 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 PUDPQ08623 228 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 KLHL17Q6TDP4 642 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 PIGWQ7Z7B1 504 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 UEVLDQ8IX04 471 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 ZNF611Q8N823 705 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 ANKK1Q8NFD2 765 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 OR52N5Q8NH56 324 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 LZICQ8WZA0 190 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 AKAP1Q92667 903 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCDC188-202ENST00000444532 TPD52L3Q96J77 140 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 CCL19Q99731 98 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 ALG2Q9H553 416 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 SLC17A5Q9NRA2 495 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 ARL2BPQ9Y2Y0 163 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 AMDHD2Q9Y303 409 aa16.36■□□□□ 0.21
CCDC188-202ENST00000444532 ITPR3Q14573 2671 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 CXCR6O00574 342 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 PLPP3O14495 311 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 GSTA4O15217 222 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 CLOCKO15516 846 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 TRAF3IP2O43734 574 aaPredicted RBP16.35■□□□□ 0.21
CCDC188-202ENST00000444532 SLC43A1O75387 559 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 OR5F1O95221 314 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 TNFRSF1BP20333 461 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 OR1E2P47887 323 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 TAS2R41P59536 307 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms