RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 HIPK4Q8NE63 616 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 ELOA3Q8NG57 546 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 MFSD8Q8NHS3 518 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 ZNF417Q8TAU3 575 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 SLC35B4Q969S0 331 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 ZNF317Q96PQ6 595 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-203ENST00000444440 ALKBH3Q96Q83 286 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-203ENST00000444440 ZNF587Q96SQ5 575 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-203ENST00000444440 CGREF1Q99674 301 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 USB1Q9BQ65 265 aaKnown RBP9.52□□□□□ -0.89
SF3A1-203ENST00000444440 TAPBPLQ9BX59 468 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 CXorf56Q9H5V9 222 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 NGBQ9NPG2 151 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 SAR1AQ9NR31 198 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 GID8Q9NWU2 228 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 CISD1Q9NZ45 108 aaKnown RBP9.52□□□□□ -0.89
SF3A1-203ENST00000444440 UPB1Q9UBR1 384 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 ABCA1O95477 2261 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 A0A0B4J2E0 115 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 A0A1B0GX12 115 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 ZNF503-AS2A6NEH8 195 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 PRORSD1PA6NEY8 169 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 MS4A18H0YCH9 400 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 M0R1B8 84 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 FXYD1O00168 92 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 LYPD3O95274 346 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 AHSA1O95433 338 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 LGI1O95970 557 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 HPRP00739 348 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 BGLAPP02818 100 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 HLA-DOBP13765 273 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 MPGP29372 298 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 ACVR1BP36896 505 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 RGS8P57771 180 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-203ENST00000444440 RBBP4Q09028 425 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 TNK1Q13470 666 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 OR1Q1Q15612 314 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 CYP51A1Q16850 503 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 MS4A18Q3C1V0 323 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 COQ5Q5HYK3 327 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 ALG10BQ5I7T1 473 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 PHYHD1Q5SRE7 291 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 TMEM225Q6GV28 225 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 NIPAL3Q6P499 406 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 WDR88Q6ZMY6 472 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 DTX2Q86UW9 622 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 MYPOPQ86VE0 399 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-203ENST00000444440 C11orf65Q8NCR3 313 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 OR1K1Q8NGR3 316 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 SLC38A4Q969I6 547 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 TAMM41Q96BW9 452 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 ZNF837Q96EG3 531 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-203ENST00000444440 MOGAT1Q96PD6 335 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 ARHGDIGQ99819 225 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 NSRP1Q9H0G5 558 aaKnown RBP9.51□□□□□ -0.89
SF3A1-203ENST00000444440 KAT8Q9H7Z6 458 aaKnown RBP9.51□□□□□ -0.89
SF3A1-203ENST00000444440 EVA1AQ9H8M9 152 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 SEC61A2Q9H9S3 476 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 C12orf10Q9HB07 376 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 PARPBPQ9NWS1 579 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 SLC13A4Q9UKG4 626 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 ANGPT4Q9Y264 503 aa9.51□□□□□ -0.89
SF3A1-203ENST00000444440 A0A087WUJ7 227 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 LOC100653049A0A140TA62 436 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 DYNC1I1O14576 645 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 TRAF3IP2O43734 574 aaPredicted RBP9.5□□□□□ -0.89
SF3A1-203ENST00000444440 KRT34O76011 436 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 HEXAP06865 529 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 CD247P20963 164 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 GRPRP30550 384 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 CDH12P55289 794 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 CLDN17P56750 224 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 TUBA1BP68363 451 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 TUBA4AP68366 448 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 NRF1Q16656 503 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 TRMT5Q32P41 509 aaKnown RBP9.5□□□□□ -0.89
SF3A1-203ENST00000444440 RABL3Q5HYI8 236 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 FAM69AQ5T7M9 428 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 INTS11Q5TA45 600 aaKnown RBP9.5□□□□□ -0.89
SF3A1-203ENST00000444440 OR7E24Q6IFN5 339 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 TMEM108Q6UXF1 575 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 NHLRC1Q6VVB1 395 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 DNM1P46Q6ZS02 220 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 TUBA1AQ71U36 451 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 CPLX4Q7Z7G2 160 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 ARMC8Q8IUR7 673 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 C1orf162Q8NEQ5 155 aaPredicted RBP9.5□□□□□ -0.89
SF3A1-203ENST00000444440 OR6T1Q8NGN1 323 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 OR10A6Q8NH74 314 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 HTRA1Q92743 480 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 LRRC58Q96CX6 371 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 BOD1Q96IK1 185 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 ECSITQ9BQ95 431 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 PIF1Q9H611 641 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 RPS6KB2Q9UBS0 482 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 TESQ9UGI8 421 aaKnown RBP9.5□□□□□ -0.89
SF3A1-203ENST00000444440 RASD1Q9Y272 281 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 B3GALT5Q9Y2C3 310 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 CAPN7Q9Y6W3 813 aa9.5□□□□□ -0.89
SF3A1-203ENST00000444440 MALRD1Q5VYJ5 2156 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms