RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 IKZF5Q9H5V7 419 aa17.34■□□□□ 0.37
EDEM1-203ENST00000443790 OBP2BQ9NPH6 170 aa17.34■□□□□ 0.37
EDEM1-203ENST00000443790 PRDM4Q9UKN5 801 aa17.34■□□□□ 0.37
EDEM1-203ENST00000443790 TRBV5-3A0A0A0MS03 114 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 FBP2O00757 339 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 PHF1O43189 567 aaPredicted RBP17.33■□□□□ 0.36
EDEM1-203ENST00000443790 FRS3O43559 492 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 F12P00748 615 aaPredicted RBP17.33■□□□□ 0.36
EDEM1-203ENST00000443790 USF1P22415 310 aaPredicted RBP17.33■□□□□ 0.36
EDEM1-203ENST00000443790 LSP1P33241 339 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 P2RY4P51582 365 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 BNIP2Q12982 314 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 NFYCQ13952 458 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 SWI5Q1ZZU3 235 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 MST1LQ2TV78 715 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 RUNDC3AQ59EK9 446 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 CYB5R2Q6BCY4 276 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 WBP2NLQ6ICG8 309 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 SPATA21Q7Z572 469 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 C10orf111Q8N326 155 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 CADM2Q8N3J6 435 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 TSPEARQ8WU66 669 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 FBXO17Q96EF6 278 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 TMEM19Q96HH6 336 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 TAPBPLQ9BX59 468 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 BEX2Q9BXY8 128 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 ADPRHL2Q9NX46 363 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 CALML5Q9NZT1 146 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 ARMCX1Q9P291 453 aa17.33■□□□□ 0.36
EDEM1-203ENST00000443790 IGHV1-18A0A0C4DH31 117 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 LOC100653049A0A140TA62 436 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 GMNCA6NCL1 334 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 TMEM247A6NEH6 219 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 A8MVM7 634 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 EVPLLA8MZ36 301 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 KRT33AO76009 404 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 KRT34O76011 436 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 DRD4P21917 467 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 PPIBP23284 216 aaKnown RBP17.32■□□□□ 0.36
EDEM1-203ENST00000443790 CRISP3P54108 245 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 COPZ1P61923 177 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 FADDQ13158 208 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 TBRG1Q3YBR2 411 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 RNF220Q5VTB9 566 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 TMEM225Q6GV28 225 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 DPP10Q8N608 796 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 OR1K1Q8NGR3 316 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 SORCS2Q96PQ0 1159 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 ALKBH3Q96Q83 286 aaPredicted RBP17.32■□□□□ 0.36
EDEM1-203ENST00000443790 SLC38A2Q96QD8 506 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 CGREF1Q99674 301 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 CPPED1Q9BRF8 314 aaPredicted RBP17.32■□□□□ 0.36
EDEM1-203ENST00000443790 THUMPD1Q9NXG2 353 aaKnown RBP17.32■□□□□ 0.36
EDEM1-203ENST00000443790 LPAR3Q9UBY5 353 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 ZNF443Q9Y2A4 671 aaPredicted RBP17.32■□□□□ 0.36
EDEM1-203ENST00000443790 FKBP7Q9Y680 259 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 ARFGEF3Q5TH69 2177 aa17.32■□□□□ 0.36
EDEM1-203ENST00000443790 ZNF587BE7ETH6 402 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 VAMP5O95183 116 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 LGI1O95970 557 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 SELENOPP49908 381 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 SNRPD2P62316 118 aaKnown RBP17.31■□□□□ 0.36
EDEM1-203ENST00000443790 LSM11P83369 360 aaKnown RBP eCLIP17.31■□□□□ 0.36
EDEM1-203ENST00000443790 LGALS3BPQ08380 585 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 SELPLGQ14242 412 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 MMEL1Q495T6 779 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 GCNT6Q5T4J0 391 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 C1orf140Q5VVS0 124 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 CREB3L2Q70SY1 520 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 CPLX4Q7Z7G2 160 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 SNX32Q86XE0 403 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 KATNB1Q9BVA0 655 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 CAPN7Q9Y6W3 813 aa17.31■□□□□ 0.36
EDEM1-203ENST00000443790 VWC2LB2RUY7 222 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 TMEM229AB2RXF0 380 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 C5orf58C9J3I9 102 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 NDUFS8O00217 210 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 NPIPB7O75200 414 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 BMP2P12643 396 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 PRG2P13727 222 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 PDLIM4P50479 330 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 MTPNP58546 118 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 LARS2Q15031 903 aaKnown RBP17.3■□□□□ 0.36
EDEM1-203ENST00000443790 PRAMEF8Q5VWM4 474 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 PRAMEF7Q5VXH5 474 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 REP15Q6BDI9 236 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 LINGO2Q7L985 606 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 CLIP4Q8N3C7 705 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 NFKBIDQ8NI38 313 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 C3orf49Q96BT1 292 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 ANKRD27Q96NW4 1050 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 KCNS3Q9BQ31 491 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 SHARPINQ9H0F6 387 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 NSRP1Q9H0G5 558 aaKnown RBP17.3■□□□□ 0.36
EDEM1-203ENST00000443790 A4GALTQ9NPC4 353 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 CA10Q9NS85 328 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 MRGBPQ9NV56 204 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 CHST2Q9Y4C5 530 aa17.3■□□□□ 0.36
EDEM1-203ENST00000443790 ARPC4-TTLL3A0A0A6YYG9 625 aa17.29■□□□□ 0.36
EDEM1-203ENST00000443790 A0A0G2JPF8 293 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms