RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 BOD1Q96IK1 185 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 OXGR1Q96P68 337 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 LINC00470Q9BZP3 86 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 VIPAS39Q9H9C1 493 aa16.47■□□□□ 0.23
CCDC78-204ENST00000439619 FTCDNL1E5RQL4 147 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 HOXB1P14653 301 aaPredicted RBP16.46■□□□□ 0.23
CCDC78-204ENST00000439619 APOBEC3AP31941 199 aaPredicted RBP16.46■□□□□ 0.23
CCDC78-204ENST00000439619 P2RY4P51582 365 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 CLDN17P56750 224 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 CYP51A1Q16850 503 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 TBRG1Q3YBR2 411 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 CLEC2AQ6UVW9 174 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 H1FNTQ75WM6 255 aaPredicted RBP16.46■□□□□ 0.23
CCDC78-204ENST00000439619 EPHX4Q8IUS5 362 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 GPR137CQ8N3F9 429 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 C11orf65Q8NCR3 313 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 OR1K1Q8NGR3 316 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 CKAP2Q8WWK9 683 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 ALKBH3Q96Q83 286 aaPredicted RBP16.46■□□□□ 0.23
CCDC78-204ENST00000439619 GDF2Q9UK05 429 aaPredicted RBP16.46■□□□□ 0.23
CCDC78-204ENST00000439619 ROS1P08922 2347 aa16.46■□□□□ 0.23
CCDC78-204ENST00000439619 TRBV5-3A0A0A0MS03 114 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 LGI1O95970 557 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 CRYAAP02489 173 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 NQO1P15559 274 aaKnown RBP16.45■□□□□ 0.22
CCDC78-204ENST00000439619 PTNP21246 168 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 AQP1P29972 269 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 EGR4Q05215 589 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 RBBP4Q09028 425 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 ANKRD16Q6P6B7 361 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 DHDDSQ86SQ9 333 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 PIK3C3Q8NEB9 887 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 PTDSS2Q9BVG9 487 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 ASPNQ9BXN1 380 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 SLC52A3Q9NQ40 469 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 CORINQ9Y5Q5 1042 aa16.45■□□□□ 0.22
CCDC78-204ENST00000439619 NSD1Q96L73 2696 aaPredicted RBP16.44■□□□□ 0.22
CCDC78-204ENST00000439619 INAFM1C9JVW0 142 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 H7C417 338 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 M0R082 166 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 NDUFS7O75251 213 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 SLC25A3Q00325 362 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 ROR2Q01974 943 aaKnown RBP16.44■□□□□ 0.22
CCDC78-204ENST00000439619 RUNDC3AQ59EK9 446 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 SWT1Q5T5J6 900 aaKnown RBP16.44■□□□□ 0.22
CCDC78-204ENST00000439619 SLC30A8Q8IWU4 369 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 KDM8Q8N371 416 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 C10orf53Q8N6V4 93 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 OR6S1Q8NH40 331 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 ZNF417Q8TAU3 575 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 MAGEE2Q8TD90 523 aaPredicted RBP16.44■□□□□ 0.22
CCDC78-204ENST00000439619 TSPEARQ8WU66 669 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 TAAR8Q969N4 342 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 SLC38A2Q96QD8 506 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 ZNF587Q96SQ5 575 aaPredicted RBP16.44■□□□□ 0.22
CCDC78-204ENST00000439619 MRGBPQ9NV56 204 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 MOKQ9UQ07 419 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 FREM1Q5H8C1 2179 aa16.44■□□□□ 0.22
CCDC78-204ENST00000439619 ARPC4-TTLL3A0A0A6YYG9 625 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 LOC102725191A0A1B0GVB3 256 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 VSTM5A8MXK1 200 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 ATP6V1G2-DDX39BF2Z307 99 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 TPST1O60507 370 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 UPK3AO75631 287 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 HTR2AP28223 471 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 GRPRP30550 384 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 OR1Q1Q15612 314 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 C3orf36Q3SXR2 165 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 METTL21CQ5VZV1 264 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 C11orf71Q6IPW1 123 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 DLEU7Q6UYE1 221 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 B3GLCTQ6Y288 498 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 UEVLDQ8IX04 471 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 CCDC36Q8IYA8 594 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 DPP10Q8N608 796 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 ADPRHL1Q8NDY3 354 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 THOC1Q96FV9 657 aaKnown RBP16.43■□□□□ 0.22
CCDC78-204ENST00000439619 CPPED1Q9BRF8 314 aaPredicted RBP16.43■□□□□ 0.22
CCDC78-204ENST00000439619 KATNB1Q9BVA0 655 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 NPHS2Q9NP85 383 aa16.43■□□□□ 0.22
CCDC78-204ENST00000439619 A0A087WUJ7 227 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 A0A096LPE4 126 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 A0A0G2JND7 137 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 A0A1W2PPZ6 126 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 RPL36A-HNRNPH2H7BZ11 118 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 FZD7O75084 574 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 CSF3P09919 207 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 SNRPD2P62316 118 aaKnown RBP16.42■□□□□ 0.22
CCDC78-204ENST00000439619 NFYCQ13952 458 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 ADRM1Q16186 407 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 GLIPR1L2Q4G1C9 344 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 INTS11Q5TA45 600 aaKnown RBP16.42■□□□□ 0.22
CCDC78-204ENST00000439619 DNM1P46Q6ZS02 220 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 SNX32Q86XE0 403 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 C10orf111Q8N326 155 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 SCAIQ8N9R8 606 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 MAPK1IP1LQ8NDC0 245 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 SLC26A7Q8TE54 656 aa16.42■□□□□ 0.22
CCDC78-204ENST00000439619 BCL2L2Q92843 193 aaPredicted RBP16.42■□□□□ 0.22
CCDC78-204ENST00000439619 ANKRD27Q96NW4 1050 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms