RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ACVR1BP36896 505 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 INPP1P49441 399 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 MRPL28Q13084 256 aaKnown RBP12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 SERTAD2Q14140 314 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 FGFBP1Q14512 234 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 POU4F3Q15319 338 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 IDNKQ5T6J7 187 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 BCL2L15Q5TBC7 163 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 ZBTB37Q5TC79 503 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 MZT2BQ6NZ67 158 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 GRAMD2AQ8IUY3 354 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 OR5M3Q8NGP4 307 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 CEP76Q8TAP6 659 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 SMPDL3BQ92485 455 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 ZMYND19Q96E35 227 aaPredicted RBP12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 DPYSL5Q9BPU6 564 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 GLTPQ9NZD2 209 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 NUP210LQ5VU65 1888 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 A0A1B0GX78 115 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 SHOXO15266 292 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 TOX3O15405 576 aaPredicted RBP12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 SERPINI2O75830 405 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 HIST1H1CP16403 213 aaKnown RBP12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 HK1P19367 917 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 SLC2A5P22732 501 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 SQSTM1Q13501 440 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 TRILQ7L0X0 811 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 BCORP1Q8N888 145 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 LSMEM1Q8N8F7 131 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 FAM98AQ8NCA5 519 aaKnown RBP12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 AKAP1Q92667 903 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 TSLPQ969D9 159 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 OR1F2PQ96R84 312 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 OR10A5Q9H207 317 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 KCNN2Q9H2S1 579 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 ZNF304Q9HCX3 659 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 C17orf105B2RV13 164 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 MCIDASD6RGH6 385 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 ORC5O43913 435 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 SLC43A1O75387 559 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 CER1O95813 267 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 MT-ND5P03915 603 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 ELK1P19419 428 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 SHC1P29353 583 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 SLC6A6P31641 620 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 PYCR1P32322 319 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 SRP9P49458 86 aaKnown RBP12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 ZNF85Q03923 595 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 GPR176Q14439 515 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 ARHGAP40Q5TG30 622 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 FAAH2Q6GMR7 532 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 ULK3Q6PHR2 472 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 OR5J2Q8NH18 312 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 NAT6Q93015 286 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 KIAA1143Q96AT1 154 aaPredicted RBP12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 HDHD2Q9H0R4 259 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 SMOC1Q9H4F8 434 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 PNO1Q9NRX1 252 aaKnown RBP12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 MGAT4AQ9UM21 535 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 MMACHCQ9Y4U1 282 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 PCDHGB7Q9Y5F8 929 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 ALPK2Q86TB3 2170 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 IGHV5-10-1A0A0J9YXX1 117 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 B8ZZF3 427 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 IMPA2O14732 288 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 CXCL3P19876 107 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 SSTR2P30874 369 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 NAA10P41227 235 aaPredicted RBP12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 AP2S1P53680 142 aaPredicted RBP12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 ATP12AP54707 1039 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 PER3P56645 1201 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 OR10A3P58181 314 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 BDH1Q02338 343 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 FUT7Q11130 342 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 ZNF141Q15928 474 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 VWA2Q5GFL6 755 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 ZNF550Q7Z398 422 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 RABEPKQ7Z6M1 372 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 PRSS58Q8IYP2 241 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 OR11H7Q8NGC8 314 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 OR4D9Q8NGE8 314 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 OR13C5Q8NGS8 318 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 PELOQ9BRX2 385 aaKnown RBP12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 G6PC3Q9BUM1 346 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 CCDC86Q9H6F5 360 aaKnown RBP12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 IER3IP1Q9Y5U9 82 aa12.67□□□□□ -0.38
PTCHD3-201ENST00000438700 NPIPB9F8W1W9 429 aa12.66□□□□□ -0.38
PTCHD3-201ENST00000438700 I3L521 148 aa12.66□□□□□ -0.38
PTCHD3-201ENST00000438700 SLC22A5O76082 557 aa12.66□□□□□ -0.38
PTCHD3-201ENST00000438700 PDGFAP04085 211 aa12.66□□□□□ -0.38
PTCHD3-201ENST00000438700 ANKRD34CP0C6C1 535 aa12.66□□□□□ -0.38
PTCHD3-201ENST00000438700 RPL4P36578 427 aaKnown RBP12.66□□□□□ -0.38
PTCHD3-201ENST00000438700 RBM34P42696 430 aaKnown RBP12.66□□□□□ -0.38
PTCHD3-201ENST00000438700 CCR4P51679 360 aa12.66□□□□□ -0.38
PTCHD3-201ENST00000438700 EFNA3P52797 238 aa12.66□□□□□ -0.38
PTCHD3-201ENST00000438700 ARHGAP11AQ6P4F7 1023 aa12.66□□□□□ -0.38
PTCHD3-201ENST00000438700 TEX261Q6UWH6 196 aa12.66□□□□□ -0.38
PTCHD3-201ENST00000438700 IDO2Q6ZQW0 420 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms