RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 TBX21Q9UL17 535 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 LCTP09848 1927 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 CKAP5Q14008 2032 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 TDRD15B5MCY1 1934 aaKnown RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 MAGEB4O15481 346 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 GCM2O75603 506 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 HIST1H1CP16403 213 aaKnown RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 S100A11P31949 105 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 TRHRP34981 398 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 DLSTP36957 453 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 RFX2P48378 723 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 HCCSP53701 268 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 GPLD1P80108 840 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 SORDQ00796 357 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 INSL4Q14641 139 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 CDK5R1Q15078 307 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF79Q15937 498 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 AADACL4Q5VUY2 407 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM225Q6GV28 225 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 OR7E24Q6IFN5 339 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ARSKQ6UWY0 536 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 USP53Q70EK8 1073 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF595Q8IYB9 648 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 OR4D11Q8NGI4 311 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 OR8D4Q8NGM9 314 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 SMAP2Q8WU79 429 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 OR1E3Q8WZA6 343 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 RBPMSQ93062 196 aaKnown RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 RASD2Q96D21 266 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ARSGQ96EG1 525 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 BMFQ96LC9 184 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ASB16Q96NS5 453 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 PRDM9Q9NQV7 894 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 C2orf42Q9NWW7 574 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 GPR55Q9Y2T6 319 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 PIAS3Q9Y6X2 628 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 A0A0B4J203 849 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM82A0PJX8 343 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 H7C1C5 153 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF264O43296 627 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 FGF17O60258 216 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 SCGNO76038 276 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 SCGB1D2O95969 90 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 SFTPBP07988 381 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 AMY2BP19961 511 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 FBLP22087 321 aaKnown RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 DIO1P49895 249 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 CLRN1P58418 232 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 LCN6P62502 163 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 CYCSP99999 105 aaKnown RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 MFSD13AQ14CX5 517 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 HYAL4Q2M3T9 481 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 SLC25A35Q3KQZ1 300 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 BPIFB2Q8N4F0 458 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 DUSP18Q8NEJ0 188 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM185AQ8NFB2 350 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 OR51D1Q8NGF3 324 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 OR5T3Q8NGG3 340 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ASB17Q8WXJ9 295 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ZBTB8AQ96BR9 441 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ZC3H10Q96K80 434 aaKnown RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 JSRP1Q96MG2 331 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 NECAB3Q96P71 396 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 PRRT1Q99946 306 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 EXO1Q9UQ84 846 aaKnown RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ADAM18Q9Y3Q7 739 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 PRAMEF26H0Y7S4 382 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 SYT7O43581 403 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 TP53P04637 393 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 EPXP11678 715 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 PVALBP20472 110 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 VEGFBP49765 207 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 EEF1A2Q05639 463 aaKnown RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 SQSTM1Q13501 440 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 MEF2DQ14814 521 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ZBTB37Q5TC79 503 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM244Q5VVB8 128 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 LIPNQ5VXI9 398 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 KANSL1Q7Z3B3 1105 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 PXKQ7Z7A4 578 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 DEFB119Q8N690 84 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 THAP3Q8WTV1 239 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 UPRTQ96BW1 309 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 FOXN4Q96NZ1 517 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 WDR76Q9H967 626 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 CHMP1AQ9HD42 196 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 SLC6A20Q9NP91 592 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 FBXO9Q9UK97 447 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 FBXL2Q9UKC9 423 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 ATXN7L1Q9ULK2 861 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 MRPS17Q9Y2R5 130 aaKnown RBP6.16□□□□□ -1.42
CSDE1-205ENST00000438362 PLXNA1Q9UIW2 1896 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 WDR81Q562E7 1941 aa6.16□□□□□ -1.42
CSDE1-205ENST00000438362 VSTM2BA6NLU5 285 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 TEX46H3BTG2 121 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 PLA2G10O15496 165 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 P2RX6O15547 441 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 GIPP09681 153 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-205ENST00000438362 CLUP10909 449 aa6.15□□□□□ -1.42
CSDE1-205ENST00000438362 LIPCP11150 499 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms