RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 JMJD8Q96S16 334 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 TXLNGYQ9BZA5 131 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 RACGAP1Q9H0H5 632 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 SLC38A1Q9H2H9 487 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 PIF1Q9H611 641 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 ESM1Q9NQ30 184 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 ZNF275Q9NSD4 429 aaPredicted RBP12.74□□□□□ -0.37
HDAC8-213ENST00000436675 RLIMQ9NVW2 624 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 MARCOQ9UEW3 520 aaPredicted RBP12.74□□□□□ -0.37
HDAC8-213ENST00000436675 CMYA5Q8N3K9 4069 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 AGAP5A6NIR3 686 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 M0R233 179 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 HMGN4O00479 90 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 FRS3O43559 492 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 HOXB1P14653 301 aaPredicted RBP12.73□□□□□ -0.37
HDAC8-213ENST00000436675 UQCRBP14927 111 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 IL7RP16871 459 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 NR4A1P22736 598 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 ARRB2P32121 409 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 ARR3P36575 388 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 ARFIP2P53365 341 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 SH3BGRP55822 239 aaPredicted RBP12.73□□□□□ -0.37
HDAC8-213ENST00000436675 LMO4P61968 165 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 CEACAM16Q2WEN9 425 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 PRR31Q5SQ13 230 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 USP43Q70EL4 1123 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 RNF130Q86XS8 419 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 CMIPQ8IY22 773 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 EPS8L3Q8TE67 593 aaKnown RBP12.73□□□□□ -0.37
HDAC8-213ENST00000436675 MRPL24Q96A35 216 aaKnown RBP12.73□□□□□ -0.37
HDAC8-213ENST00000436675 MS4A3Q96HJ5 214 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 C16orf45Q96MC5 204 aaPredicted RBP12.73□□□□□ -0.37
HDAC8-213ENST00000436675 SLC35A5Q9BS91 424 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 LINC00470Q9BZP3 86 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 DPY30Q9C005 99 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 GPR35Q9HC97 309 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 MYEF2Q9P2K5 600 aaKnown RBP12.73□□□□□ -0.37
HDAC8-213ENST00000436675 RASD1Q9Y272 281 aa12.73□□□□□ -0.37
HDAC8-213ENST00000436675 NOTCH1P46531 2555 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 TRAV20A0A0B4J274 112 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 A8MVM7 634 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 FAAHO00519 579 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 NCR1O76036 304 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 VAMP5O95183 116 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 HLA-HP01893 362 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 CD79AP11912 226 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 ACHEP22303 614 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 LIMS1P48059 325 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 MAP2K6P52564 334 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 PIGFQ07326 219 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 ALKBH6Q3KRA9 238 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 SLC9B1Q4ZJI4 515 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 C1orf140Q5VVS0 124 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 ATG16L1Q676U5 607 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 IFT20Q8IY31 132 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 GPR137CQ8N3F9 429 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 ZDHHC22Q8N966 263 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 MNS1Q8NEH6 495 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 C22orf15Q8WYQ4 148 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 ANP32BQ92688 251 aaKnown RBP12.72□□□□□ -0.37
HDAC8-213ENST00000436675 NEURL3Q96EH8 262 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 SUCNR1Q9BXA5 334 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 MS4A5Q9H3V2 200 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 MOV10Q9HCE1 1003 aaKnown RBP12.72□□□□□ -0.37
HDAC8-213ENST00000436675 SLC17A7Q9P2U7 560 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 SEC14L4Q9UDX3 406 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 NOX1Q9Y5S8 564 aa12.72□□□□□ -0.37
HDAC8-213ENST00000436675 PRSS51A0A1B0GVH4 220 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 CDC14BO60729 498 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 SLC43A1O75387 559 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 BCL10O95999 233 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 NAT2P11245 290 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 MYBPC1Q00872 1141 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 MVKQ03426 396 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 EMX2Q04743 252 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 MAD2L1Q13257 205 aaPredicted RBP12.71□□□□□ -0.37
HDAC8-213ENST00000436675 GNA13Q14344 377 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 GSTA3Q16772 222 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 AVPI1Q5T686 147 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 VRK2Q86Y07 508 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 HOMEZQ8IX15 550 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 CNPY4Q8N129 248 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 RIBC1Q8N443 379 aaPredicted RBP12.71□□□□□ -0.37
HDAC8-213ENST00000436675 BPIFB2Q8N4F0 458 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 OR8J2Q8NGG1 315 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 TRNT1Q96Q11 434 aaKnown RBP12.71□□□□□ -0.37
HDAC8-213ENST00000436675 ZNF747Q9BV97 191 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 ZNF696Q9H7X3 374 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 MTHFD2LQ9H903 347 aaPredicted RBP12.71□□□□□ -0.37
HDAC8-213ENST00000436675 G6PC2Q9NQR9 355 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 NOP53Q9NZM5 478 aaKnown RBP12.71□□□□□ -0.37
HDAC8-213ENST00000436675 DUSP13Q9UII6 198 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 PPIAL4AQ9Y536 164 aa12.71□□□□□ -0.37
HDAC8-213ENST00000436675 RPL36A-HNRNPH2H7BZ11 118 aa12.7□□□□□ -0.38
HDAC8-213ENST00000436675 M0R3G1 203 aa12.7□□□□□ -0.38
HDAC8-213ENST00000436675 ZNF432O94892 652 aa12.7□□□□□ -0.38
HDAC8-213ENST00000436675 MPZL1O95297 269 aa12.7□□□□□ -0.38
HDAC8-213ENST00000436675 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
HDAC8-213ENST00000436675 TFPTP0C1Z6 253 aa12.7□□□□□ -0.38
HDAC8-213ENST00000436675 NR2F1P10589 423 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms