RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ASAH2BP0C7U1 165 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 SDHAP31040 664 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 UQCRC1P31930 480 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 RORAP35398 523 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 CDKN2AP42771 156 aaKnown RBP16.94■□□□□ 0.3
CLK1-205ENST00000434813 MMP15P51511 669 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 PITPNAQ00169 270 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 ALG10Q5BKT4 473 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 APOOLQ6UXV4 268 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 SYT9Q86SS6 491 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 TMEM246Q9BRR3 403 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 NIPAL2Q9H841 368 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 PNO1Q9NRX1 252 aaKnown RBP16.94■□□□□ 0.3
CLK1-205ENST00000434813 SPATA2Q9UM82 520 aa16.94■□□□□ 0.3
CLK1-205ENST00000434813 COL5A1P20908 1838 aaPredicted RBP16.94■□□□□ 0.3
CLK1-205ENST00000434813 BLOC1S5-TXNDC5H3BN57 136 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 TXNDC12O95881 172 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 IGKV3-11P04433 115 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 ERP29P30040 261 aaKnown RBP16.93■□□□□ 0.3
CLK1-205ENST00000434813 PSMB10P40306 273 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 EPHA4P54764 986 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 RACK1P63244 317 aaKnown RBP16.93■□□□□ 0.3
CLK1-205ENST00000434813 EGR4Q05215 589 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 NUP54Q7Z3B4 507 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 C10orf53Q8N6V4 93 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 OR4D9Q8NGE8 314 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 AKAP1Q92667 903 aaKnown RBP eCLIP16.93■□□□□ 0.3
CLK1-205ENST00000434813 YIPF5Q969M3 257 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 LCORQ96JN0 433 aaPredicted RBP16.93■□□□□ 0.3
CLK1-205ENST00000434813 CMTM3Q96MX0 182 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 SLA2Q9H6Q3 261 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 C12orf10Q9HB07 376 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 BRD7Q9NPI1 651 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 PLSCR3Q9NRY6 295 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 RXFP3Q9NSD7 469 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 MCUBQ9NWR8 336 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 ING3Q9NXR8 418 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 MOKQ9UQ07 419 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 BOLA1Q9Y3E2 137 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 KNL1Q8NG31 2342 aa16.93■□□□□ 0.3
CLK1-205ENST00000434813 A0A0B4J203 849 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 OR6C70A6NIJ9 312 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 LMO7DNF2Z398 122 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 SERPINI2O75830 405 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 MAOBP27338 520 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 EFR3AQ14156 821 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 NTRK2Q16620 822 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 DEFB133Q30KQ1 61 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 SLC36A2Q495M3 483 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 C14orf28Q4W4Y0 310 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 SLC6A19Q695T7 634 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 OGFOD3Q6PK18 319 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 SLC16A9Q7RTY1 509 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 TMEM151BQ8IW70 566 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 SLC35F3Q8IY50 421 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 CLIP3Q96DZ5 547 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 MVB12AQ96EY5 273 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 OR8D2Q9GZM6 311 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 MRTO4Q9UKD2 239 aaKnown RBP16.92■□□□□ 0.3
CLK1-205ENST00000434813 ZNF281Q9Y2X9 895 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 A0A1B0GVT2 93 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 PRR32B1ATL7 298 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 CPNE3O75131 537 aaKnown RBP16.92■□□□□ 0.3
CLK1-205ENST00000434813 C1QBP02746 253 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 GZMKP49863 264 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 KCNAB1Q14722 419 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 YIF1BQ5BJH7 314 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 TTLL10Q6ZVT0 673 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 KRT74Q7RTS7 529 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 TSLPQ969D9 159 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 RNF166Q96A37 237 aaPredicted RBP16.92■□□□□ 0.3
CLK1-205ENST00000434813 ADIPOR1Q96A54 375 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 GFM1Q96RP9 751 aaKnown RBP16.92■□□□□ 0.3
CLK1-205ENST00000434813 SMAD5Q99717 465 aaKnown RBP16.92■□□□□ 0.3
CLK1-205ENST00000434813 NOX4Q9NPH5 578 aa16.92■□□□□ 0.3
CLK1-205ENST00000434813 AK6Q9Y3D8 172 aaKnown RBP16.92■□□□□ 0.3
CLK1-205ENST00000434813 C4orf47A7E2U8 309 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 OR2B3O76000 313 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 DDAH2O95865 285 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 LCN1P31025 176 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 CTXN1P60606 82 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 LTBQ06643 244 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 FAPQ12884 760 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 EMC4Q5J8M3 183 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 UBE2NLQ5JXB2 153 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 NKAIN2Q5VXU1 208 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 UBALD2Q8IYN6 164 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 LGALS14Q8TCE9 139 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 ZFAND1Q8TCF1 268 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 ZNF721Q8TF20 911 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 HSD17B8Q92506 261 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 LPAR4Q99677 370 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 NDEL1Q9GZM8 345 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 LAT2Q9GZY6 243 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 DPAGT1Q9H3H5 408 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 GALNT9Q9HCQ5 603 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 CLEC4AQ9UMR7 237 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 CAMK2AQ9UQM7 478 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 A0A1B0GTQ1 180 aa16.91■□□□□ 0.3
CLK1-205ENST00000434813 PDCD5O14737 125 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms