RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 IQCCQ4KMZ1 466 aa12.39□□□□□ -0.43
SMARCE1-205ENST00000431889 GLB1L3Q8NCI6 653 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-205ENST00000431889 NFKBIDQ8NI38 313 aa12.39□□□□□ -0.43
SMARCE1-205ENST00000431889 TAAR8Q969N4 342 aa12.39□□□□□ -0.43
SMARCE1-205ENST00000431889 WFDC6Q9BQY6 131 aa12.39□□□□□ -0.43
SMARCE1-205ENST00000431889 EMC6Q9BV81 110 aa12.39□□□□□ -0.43
SMARCE1-205ENST00000431889 SPATA9Q9BWV2 254 aa12.39□□□□□ -0.43
SMARCE1-205ENST00000431889 PAIP1Q9H074 479 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-205ENST00000431889 LOC100289279A0A1B0GTE1 492 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 FTCDNL1E5RQL4 147 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 LRRN3E7EW58 273 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 LYNX1G3V0Z9 82 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 M0R082 166 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 CLIC1O00299 241 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 TPST1O60507 370 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 NPIPB7O75200 414 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 LYNX1P0DP58 116 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 HLA-DOBP13765 273 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 THBS4P35443 961 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 PDLIM4P50479 330 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 AQP5P55064 265 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 SNRPD2P62316 118 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 HGFACQ04756 655 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 RGNQ15493 299 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 KRTAP24-1Q3LI83 254 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 RNF220Q5VTB9 566 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 SVOPLQ8N434 492 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 ZNF417Q8TAU3 575 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 GTF2H4Q92759 462 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 MSI2Q96DH6 328 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 MAELQ96JY0 434 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 ZNF587Q96SQ5 575 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 BPESC1Q9GZL8 116 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 SHARPINQ9H0F6 387 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 RMND5AQ9H871 391 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 SLC25A37Q9NYZ2 338 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 CALML5Q9NZT1 146 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 B3GAT1Q9P2W7 334 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 CDC42EP3Q9UKI2 254 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 RAB21Q9UL25 225 aa12.38□□□□□ -0.43
SMARCE1-205ENST00000431889 STAB1Q9NY15 2570 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 A0A0G2JPF8 293 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 HNRNPCL2B2RXH8 293 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 HNRNPCL3B7ZW38 293 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 M0R3G1 203 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 LMX1BO60663 402 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 HNRNPCL1O60812 293 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 SERPINI2O75830 405 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 CRYAAP02489 173 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 HNRNPCL4P0DMR1 293 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 BMP4P12644 408 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 APEHP13798 732 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 ZNF43P17038 809 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 GTF2E2P29084 291 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 AQP1P29972 269 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 IL2RGP31785 369 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 NR4A2P43354 598 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 C1DQ13901 141 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 CEACAM16Q2WEN9 425 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 MIER2Q8N344 545 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 PIMREGQ9BSJ6 248 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 TPK1Q9H3S4 243 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 CACYBPQ9HB71 228 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 SDR39U1Q9NRG7 319 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 RPS6KB2Q9UBS0 482 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 RASD1Q9Y272 281 aa12.37□□□□□ -0.43
SMARCE1-205ENST00000431889 IGKV1D-42A0A075B6H8 117 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 VWC2LB2RUY7 222 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 C5orf58C9J3I9 102 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 HPRP00739 348 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 ZCCHC18P0CG32 403 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 GRPRP30550 384 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 MAP2K6P52564 334 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 PIGFQ07326 219 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 LRRC74AQ0VAA2 488 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 FAM120AOSQ5T036 256 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 KRT80Q6KB66 452 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 SPATA21Q7Z572 469 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 ABHD12BQ7Z5M8 362 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 MSRB3Q8IXL7 192 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 CDK20Q8IZL9 346 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 KIRREL3Q8IZU9 778 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 MFSD8Q8NHS3 518 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 TMEM158Q8WZ71 300 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 PROX1Q92786 737 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 MS4A3Q96HJ5 214 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 EBF4Q9BQW3 602 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 IKZF5Q9H5V7 419 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 NOX3Q9HBY0 568 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 CRLF2Q9HC73 371 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 GPR35Q9HC97 309 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 ZIM2Q9NZV7 527 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 FZR1Q9UM11 496 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 FKBP7Q9Y680 259 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 USH1CQ9Y6N9 552 aa12.36□□□□□ -0.43
SMARCE1-205ENST00000431889 A0A1B0GWA3 101 aa12.35□□□□□ -0.43
SMARCE1-205ENST00000431889 TMEM247A6NEH6 219 aa12.35□□□□□ -0.43
SMARCE1-205ENST00000431889 hCG_2039718K7EN88 272 aa12.35□□□□□ -0.43
SMARCE1-205ENST00000431889 TXNL4AP83876 142 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-205ENST00000431889 PAGE3Q5JUK9 113 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms