RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PSAPL1Q6NUJ1 521 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 CD300LDQ6UXZ3 194 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 SLC36A4Q6YBV0 504 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM83HQ6ZRV2 1179 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 SZRD1Q7Z422 152 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 PPP1R3BQ86XI6 285 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 LRRC56Q8IYG6 542 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 MFSD9Q8NBP5 474 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR52N4Q8NGI2 321 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR13D1Q8NGV5 346 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR10R2Q8NGX6 335 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR52I2Q8NH67 350 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 NUBPLQ8TB37 319 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 DUSP19Q8WTR2 217 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 TMEM40Q8WWA1 233 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 FCAMRQ8WWV6 532 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 ING5Q8WYH8 240 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 WNT8BQ93098 351 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 PIK3IP1Q96FE7 263 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 KIRREL1Q96J84 757 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 PACRGQ96M98 296 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 COPS8Q99627 209 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM83CQ9BQN1 747 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 ZNF649Q9BS31 505 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 ZNF426Q9BUY5 554 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 MFRPQ9BY79 579 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 ACPTQ9BZG2 426 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 FN3KRPQ9HA64 309 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 STARD10Q9Y365 291 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 ZNF236Q9UL36 1845 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 MOXD2PA6NHM9 499 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 K7EP13 123 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 MAFKO60675 156 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 IGFBP1P08833 259 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 LAMP1P11279 417 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 CCND3P30281 292 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 DLSTP36957 453 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR3A1P47881 315 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 GIPRP48546 466 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 TAF6P49848 677 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 STC1P52823 247 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 RGNQ15493 299 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 DCAF4L1Q3SXM0 396 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 LINGO2Q7L985 606 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 CXXC5Q7LFL8 322 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 P4HA3Q7Z4N8 544 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM160A2Q8N612 972 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR2L3Q8NG85 312 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 SLC7A13Q8TCU3 470 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 RNASE8Q8TDE3 154 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 LINGO1Q96FE5 620 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 IP6K3Q96PC2 410 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 ATXN3LQ9H3M9 355 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 MARCH5Q9NX47 278 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 COMMD9Q9P000 198 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 WIF1Q9Y5W5 379 aa8.17□□□□□ -1.1
CDC42BPA-206ENST00000429440 MBLAC1A4D2B0 266 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM171A2A8MVW0 826 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAAHO00519 579 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 PIRO00625 290 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 DVL2O14641 736 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST1H2BKO60814 126 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 IL18BPO95998 194 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 IGHA1P01876 353 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST1H2BJP06899 126 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 CHRM4P08173 479 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 GZMBP10144 247 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST1H2BOP23527 126 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 PRPH2P23942 346 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 LMO2P25791 158 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 CCR1P32246 355 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST1H2BBP33778 126 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAUP35544 74 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 RPS10P46783 165 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 DGKEP52429 567 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST1H2BDP58876 126 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 ERVFC1-1P60608 527 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST1H2BCP62807 126 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 MEF2DQ14814 521 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST2H2BEQ16778 126 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 PTPRNQ16849 979 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 SLC25A35Q3KQZ1 300 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 UBE2NLQ5JXB2 153 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 LY6G6FQ5SQ64 297 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 C9orf57Q5W0N0 161 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 GCNT2Q8N0V5 402 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 NUDT10Q8NFP7 164 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 FIBINQ8TAL6 211 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST1H2BHQ93079 126 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 C5orf34Q96MH7 638 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 WDR92Q96MX6 357 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST1H2BNQ99877 126 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 HIST1H2BMQ99879 126 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 PTPN18Q99952 460 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 CWH43Q9H720 699 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 TRPV4Q9HBA0 871 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 RDH14Q9HBH5 336 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 TAS2R10Q9NYW0 307 aa8.16□□□□□ -1.1
CDC42BPA-206ENST00000429440 A4GNTQ9UNA3 340 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms