RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 ZNF486Q96H40 463 aaPredicted RBP12.47□□□□□ -0.41
THBS3-202ENST00000428962 Q96M85 177 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 MOGAT1Q96PD6 335 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 CTRCQ99895 268 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 OR2B2Q9GZK3 357 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 ADAM19Q9H013 955 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 RPRD1BQ9NQG5 326 aaKnown RBP12.47□□□□□ -0.41
THBS3-202ENST00000428962 DDX28Q9NUL7 540 aaKnown RBP12.47□□□□□ -0.41
THBS3-202ENST00000428962 ACOXLQ9NUZ1 547 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 GRHPRQ9UBQ7 328 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 POU2F3Q9UKI9 436 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 COPS3Q9UNS2 423 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 HCRTR2O43614 444 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 PRKNO60260 465 aaPredicted RBP12.46□□□□□ -0.41
THBS3-202ENST00000428962 TMEM127O75204 238 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 TACSTD2P09758 323 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 PGCP20142 388 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 ZNF117Q03924 483 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 HSD17B12Q53GQ0 312 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 LINC01590Q5TEZ4 76 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 WDR74Q6RFH5 385 aaPredicted RBP12.46□□□□□ -0.41
THBS3-202ENST00000428962 IL20RBQ6UXL0 311 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 C9orf40Q8IXQ3 194 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 SLC35F3Q8IY50 421 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 PRR22Q8IZ63 422 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 GHDCQ8N2G8 530 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 OR13C5Q8NGS8 318 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 ZPLD1Q8TCW7 415 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 SLC7A6Q92536 515 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 MNTQ99583 582 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 DPYSL5Q9BPU6 564 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 TBL1XR1Q9BZK7 514 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 WWTR1Q9GZV5 400 aa12.46□□□□□ -0.41
THBS3-202ENST00000428962 BDP1A6H8Y1 2624 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 ALG1L2C9J202 215 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 PDCD5O14737 125 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 NDUFB5O43674 189 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 ORC5O43913 435 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 TSPAN2O60636 221 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 RENP00797 406 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 FOLR1P15328 257 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 CXCR1P25024 350 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 MST1P26927 711 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 CSF2RBP32927 897 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 CDKN2AP42771 156 aaKnown RBP12.46□□□□□ -0.42
THBS3-202ENST00000428962 NR4A2P43354 598 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 NR0B1P51843 470 aaKnown RBP12.46□□□□□ -0.42
THBS3-202ENST00000428962 CLDN20P56880 219 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 PITPNAQ00169 270 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 EGR4Q05215 589 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 YIF1BQ5BJH7 314 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 UBE2J2Q8N2K1 259 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 Q8N9G6 341 aaPredicted RBP12.46□□□□□ -0.42
THBS3-202ENST00000428962 OR1N1Q8NGS0 311 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 OR2T4Q8NH00 348 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 RPS4Y2Q8TD47 263 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 ST6GAL2Q96JF0 529 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 SNX18Q96RF0 628 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 LPAR4Q99677 370 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 WACQ9BTA9 647 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 RABL2AQ9UBK7 228 aaPredicted RBP12.46□□□□□ -0.42
THBS3-202ENST00000428962 RABL2BQ9UNT1 228 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 SRPK3Q9UPE1 567 aa12.46□□□□□ -0.42
THBS3-202ENST00000428962 SPTBP11277 2137 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 HEATR5AQ86XA9 2040 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 TP53BP1Q12888 1972 aaPredicted RBP12.45□□□□□ -0.42
THBS3-202ENST00000428962 TRAV36DV7A0A075B6V5 113 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 SLC25A12O75746 678 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 EPXP11678 715 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 GP1BBP13224 206 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 BCKDHBP21953 392 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 ITPKBP27987 946 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 PNLIPRP2P54317 469 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 CFHR1Q03591 330 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 RPL18Q07020 188 aaKnown RBP12.45□□□□□ -0.42
THBS3-202ENST00000428962 CBFBQ13951 182 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 SLC25A35Q3KQZ1 300 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 SIX5Q8N196 739 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 EXD3Q8N9H8 876 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 UBASH3BQ8TF42 649 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 ZNRF4Q8WWF5 429 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 CREB3L1Q96BA8 519 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 OMA1Q96E52 524 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 KTI12Q96EK9 354 aaPredicted RBP12.45□□□□□ -0.42
THBS3-202ENST00000428962 CMTM3Q96MX0 182 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 OR14A2Q96R54 314 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 THAP7Q9BT49 309 aaPredicted RBP12.45□□□□□ -0.42
THBS3-202ENST00000428962 ZNF768Q9H5H4 540 aaKnown RBP12.45□□□□□ -0.42
THBS3-202ENST00000428962 ZCCHC4Q9H5U6 513 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 MKL2Q9ULH7 1088 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 ZNF281Q9Y2X9 895 aa12.45□□□□□ -0.42
THBS3-202ENST00000428962 CEP192Q8TEP8 1941 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 A0A1B0GVT2 93 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 CENPXA8MT69 81 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 MAGEB4O15481 346 aaPredicted RBP12.44□□□□□ -0.42
THBS3-202ENST00000428962 FZD7O75084 574 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 SLC43A1O75387 559 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 MT-ATP6P00846 226 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms