RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ETS2P15036 469 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 ZNF43P17038 809 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 CBLP22681 906 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 HTR2AP28223 471 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 NCALDP61601 193 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 LOXL1Q08397 574 aaPredicted RBP14.88□□□□□ -0.03
TRIM39-209ENST00000428728 VHLLQ6RSH7 139 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 FUNDC1Q8IVP5 155 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 ZNF417Q8TAU3 575 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 RNF217Q8TC41 542 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 LRRC8CQ8TDW0 803 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 C10orf105Q8TEF2 133 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 BCL2L2Q92843 193 aaPredicted RBP14.88□□□□□ -0.03
TRIM39-209ENST00000428728 SLC35B4Q969S0 331 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 SPDL1Q96EA4 605 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 C7orf26Q96N11 449 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 SORCS2Q96PQ0 1159 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 ZNF587Q96SQ5 575 aaPredicted RBP14.88□□□□□ -0.03
TRIM39-209ENST00000428728 RSPO3Q9BXY4 272 aaPredicted RBP14.88□□□□□ -0.03
TRIM39-209ENST00000428728 NELFAQ9H3P2 528 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 SEC61A2Q9H9S3 476 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 AIM2O14862 343 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 SLC43A1O75387 559 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 CRYAAP02489 173 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 CSF3P09919 207 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 CECR9P0C854 216 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 ZNF16P17020 682 aaPredicted RBP14.87□□□□□ -0.03
TRIM39-209ENST00000428728 PRKAR1BP31321 381 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 IDH3AP50213 366 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 SNRPD2P62316 118 aaKnown RBP14.87□□□□□ -0.03
TRIM39-209ENST00000428728 CDK6Q00534 326 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 C1DQ13901 141 aaKnown RBP14.87□□□□□ -0.03
TRIM39-209ENST00000428728 CARTPTQ16568 116 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 MST1LQ2TV78 715 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 CHRFAM7AQ494W8 412 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 GLIPR1L2Q4G1C9 344 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 ALG10BQ5I7T1 473 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 PAGE3Q5JUK9 113 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 LRIF1Q5T3J3 769 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 FAM69AQ5T7M9 428 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 ANKRD16Q6P6B7 361 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 BLOC1S3Q6QNY0 202 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 C6orf89Q6UWU4 347 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 SLC46A3Q7Z3Q1 461 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 GPR137CQ8N3F9 429 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 SLC38A4Q969I6 547 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 TAAR8Q969N4 342 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 BOD1Q96IK1 185 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 KATNB1Q9BVA0 655 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 PRR14Q9BWN1 585 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 LINC00470Q9BZP3 86 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 CA10Q9NS85 328 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 VAPAQ9P0L0 249 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 B3GAT1Q9P2W7 334 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 RCE1Q9Y256 329 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 FKBP7Q9Y680 259 aa14.87□□□□□ -0.03
TRIM39-209ENST00000428728 ANK3Q12955 4377 aaKnown RBP14.87□□□□□ -0.03
TRIM39-209ENST00000428728 ARPC4-TTLL3A0A0A6YYG9 625 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 TPST1O60507 370 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 SEC14L2O76054 403 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 CELA3BP08861 270 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 PPIBP23284 216 aaKnown RBP14.86□□□□□ -0.03
TRIM39-209ENST00000428728 AQP1P29972 269 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 GRPRP30550 384 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 MRPL19P49406 292 aaKnown RBP14.86□□□□□ -0.03
TRIM39-209ENST00000428728 SH3BGRP55822 239 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-209ENST00000428728 RGS8P57771 180 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-209ENST00000428728 ARF1P84077 181 aaKnown RBP14.86□□□□□ -0.03
TRIM39-209ENST00000428728 VLDLRP98155 873 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 NAAAQ02083 359 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 SWI5Q1ZZU3 235 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 AGBL2Q5U5Z8 902 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 REEP3Q6NUK4 255 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 DHRS4L2Q6PKH6 230 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 MYPOPQ86VE0 399 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-209ENST00000428728 KRT73Q86Y46 540 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 OXGR1Q96P68 337 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 VRK1Q99986 396 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-209ENST00000428728 IKZF5Q9H5V7 419 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 C12orf10Q9HB07 376 aa14.86□□□□□ -0.03
TRIM39-209ENST00000428728 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-209ENST00000428728 IGKV1D-42A0A075B6H8 117 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 TRAV36DV7A0A075B6V5 113 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 OR2T1O43869 369 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 ZNF432O94892 652 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 F12P00748 615 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-209ENST00000428728 IFNA2P01563 188 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 NQO1P15559 274 aaKnown RBP14.85□□□□□ -0.03
TRIM39-209ENST00000428728 CALCRP30988 508 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 PDLIM4P50479 330 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 IDH3GP51553 393 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-209ENST00000428728 AQP5P55064 265 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 SCARB2Q14108 478 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 GGTLC2Q14390 218 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 CEACAM16Q2WEN9 425 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 AGKQ53H12 422 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 PODNL1Q6PEZ8 512 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 C5orf46Q6UWT4 87 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 LSMEM1Q8N8F7 131 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 ANKS4BQ8N8V4 417 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms