RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 LTBQ06643 244 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 PLA2G7Q13093 441 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 CDK10Q15131 360 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 QPRTQ15274 297 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 PLK5Q496M5 336 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 CEP78Q5JTW2 689 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 TCEAL6Q6IPX3 200 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 LCN10Q6JVE6 187 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 NOXA1Q86UR1 476 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 OR6N2Q8NGY6 317 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 TCEAL3Q969E4 200 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 AMELYQ99218 206 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 STACQ99469 402 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 GMEB2Q9UKD1 530 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 GSTK1Q9Y2Q3 226 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 SF3B6Q9Y3B4 125 aaKnown RBP7.64□□□□□ -1.19
CD44-208ENST00000428726 HRH3Q9Y5N1 445 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 ALG5Q9Y673 324 aa7.64□□□□□ -1.19
CD44-208ENST00000428726 ROS1P08922 2347 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 TRBV2A0A0J9YWF9 115 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 OR5K4A6NMS3 321 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 IFI6P09912 130 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 KLK2P20151 261 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 RPS4Y1P22090 263 aaKnown RBP7.63□□□□□ -1.19
CD44-208ENST00000428726 BLKP51451 505 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 FBXW4P57775 412 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 ZNF85Q03923 595 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 ACSM3Q53FZ2 586 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 EXOSC6Q5RKV6 272 aaKnown RBP7.63□□□□□ -1.19
CD44-208ENST00000428726 CARD17Q5XLA6 110 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 PM20D2Q8IYS1 436 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 RNF113BQ8IZP6 322 aaKnown RBP7.63□□□□□ -1.19
CD44-208ENST00000428726 UXS1Q8NBZ7 420 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 NAXEQ8NCW5 288 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 PMM1Q92871 262 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 SLC25A46Q96AG3 418 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 TMCO6Q96DC7 493 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 JSRP1Q96MG2 331 aaPredicted RBP7.63□□□□□ -1.19
CD44-208ENST00000428726 ZNF578Q96N58 590 aaPredicted RBP7.63□□□□□ -1.19
CD44-208ENST00000428726 WDFY2Q96P53 400 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 OR6C1Q96RD1 312 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 PHF7Q9BWX1 381 aaPredicted RBP7.63□□□□□ -1.19
CD44-208ENST00000428726 C1QTNF6Q9BXI9 259 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 NANSQ9NR45 359 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 MED11Q9P086 117 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 ZNF223Q9UK11 482 aaPredicted RBP7.63□□□□□ -1.19
CD44-208ENST00000428726 ZNF222Q9UK12 451 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 PRR14LQ5THK1 2151 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 A0A0B4J2E0 115 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 A0A1B0GX12 115 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 SERINC4A6NH21 518 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 METTL12A8MUP2 240 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 RNF13O43567 381 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 UTS2O95399 124 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 WNT11O96014 354 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 SBK2P0C263 348 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 TFPIP10646 304 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 GPR3P46089 330 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 CCR6P51684 374 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 ZSWIM7Q19AV6 140 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 GFOD2Q3B7J2 385 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 SMUG1Q53HV7 270 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 BCL2L15Q5TBC7 163 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 HLA-DQA1Q5Y7H0 255 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 SFRP4Q6FHJ7 346 aaPredicted RBP7.63□□□□□ -1.19
CD44-208ENST00000428726 LRRN1Q6UXK5 716 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 RTL4Q6ZR62 310 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 LINC00346Q8IVM7 164 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 OR4M1Q8NGD0 313 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 ZNF671Q8TAW3 534 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 SLC7A6Q92536 515 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 KISS1RQ969F8 398 aaPredicted RBP7.63□□□□□ -1.19
CD44-208ENST00000428726 UPRTQ96BW1 309 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 CCDC120Q96HB5 630 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 MED18Q9BUE0 208 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 BABAM2Q9NXR7 383 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 ADGRG4Q8IZF6 3080 aa7.63□□□□□ -1.19
CD44-208ENST00000428726 CTNSO60931 367 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 LYPD3O95274 346 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 SRFP11831 508 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ZNF3P17036 446 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 HTR1FP30939 366 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 GABRA5P31644 462 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 FMODQ06828 376 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 EFR3AQ14156 821 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 YOD1Q5VVQ6 348 aaPredicted RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 SYT13Q7L8C5 426 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 EID2Q8N6I1 236 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 LSM14AQ8ND56 463 aaKnown RBP7.62□□□□□ -1.19
CD44-208ENST00000428726 OR8H1Q8NGG4 311 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 SLC2A12Q8TD20 617 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 DEDD2Q8WXF8 326 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 NSMAFQ92636 917 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 NKD1Q969G9 470 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ZNF649Q9BS31 505 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 OR2B2Q9GZK3 357 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 SLC22A4Q9H015 551 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 RNF121Q9H920 327 aa7.62□□□□□ -1.19
CD44-208ENST00000428726 ADGRL4Q9HBW9 690 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms