RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SLCO1B7G3V0H7 640 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 LILRA1O75019 489 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 NPIPB7O75200 414 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 IGLV1-44P01699 117 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 IL6P05231 212 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 TFPTP0C1Z6 253 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 DAOP14920 347 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 NCF2P19878 526 aaPredicted RBP14.33□□□□□ -0.12
VARS-216ENST00000428445 CBLP22681 906 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 CRATP43155 626 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 BST1Q10588 318 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 EFNB3Q15768 340 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 PHYHD1Q5SRE7 291 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 SPATA21Q7Z572 469 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 SLC38A5Q8WUX1 472 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 KTI12Q96EK9 354 aaPredicted RBP14.33□□□□□ -0.12
VARS-216ENST00000428445 ZNF317Q96PQ6 595 aaPredicted RBP14.33□□□□□ -0.12
VARS-216ENST00000428445 SNX18Q96RF0 628 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 ZBTB18Q99592 522 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 PAIP2Q9BPZ3 127 aaKnown RBP14.33□□□□□ -0.12
VARS-216ENST00000428445 PTDSS2Q9BVG9 487 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 RSPO3Q9BXY4 272 aaPredicted RBP14.33□□□□□ -0.12
VARS-216ENST00000428445 ARMC7Q9H6L4 198 aa14.33□□□□□ -0.12
VARS-216ENST00000428445 MOV10Q9HCE1 1003 aaKnown RBP14.33□□□□□ -0.12
VARS-216ENST00000428445 A0A096LPI6 279 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 TRPC5OSA6NMA1 111 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 FTCDNL1E5RQL4 147 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 RFXANKO14593 260 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 ZCCHC18P0CG32 403 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 KITP10721 976 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 PNMTP11086 282 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 EPHA3P29320 983 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 COPZ1P61923 177 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 EGR4Q05215 589 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 NPRL3Q12980 569 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 MSMPQ1L6U9 139 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 LIN52Q52LA3 116 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 CDK20Q8IZL9 346 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 VPS33AQ96AX1 596 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 RAB1BQ9H0U4 201 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 TPK1Q9H3S4 243 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 KCNK9Q9NPC2 374 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 THAP1Q9NVV9 213 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 P2RX2Q9UBL9 471 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.32□□□□□ -0.126e-8■■□□□ 11.5
VARS-216ENST00000428445 FBXO9Q9UK97 447 aaPredicted RBP14.32□□□□□ -0.12
VARS-216ENST00000428445 ZNF232Q9UNY5 417 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 RASD1Q9Y272 281 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 V9GYY5 206 aaPredicted RBP14.32□□□□□ -0.12
VARS-216ENST00000428445 DSPPQ9NZW4 1301 aa14.32□□□□□ -0.12
VARS-216ENST00000428445 HDAC3O15379 428 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 ZNF432O94892 652 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 IGKV3-15P01624 115 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 NUDT7P0C024 238 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 HOXB1P14653 301 aaPredicted RBP14.31□□□□□ -0.12
VARS-216ENST00000428445 CBR1P16152 277 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 ITGA2P17301 1181 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 HNF1AP20823 631 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 APEX1P27695 318 aaKnown RBP14.31□□□□□ -0.12
VARS-216ENST00000428445 PPOXP50336 477 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 DSTNP60981 165 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 CCNIQ14094 377 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 SQLEQ14534 574 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 ADRM1Q16186 407 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 C3orf36Q3SXR2 165 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 KRT80Q6KB66 452 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 MDP1Q86V88 176 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 TMEM19Q96HH6 336 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 LINC00470Q9BZP3 86 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 CENPHQ9H3R5 247 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 GPR35Q9HC97 309 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 MYOZ1Q9NP98 299 aaPredicted RBP14.31□□□□□ -0.12
VARS-216ENST00000428445 B3GAT1Q9P2W7 334 aa14.31□□□□□ -0.12
VARS-216ENST00000428445 TMEFF2Q9UIK5 374 aaPredicted RBP14.31□□□□□ -0.12
VARS-216ENST00000428445 IGHV2OR16-5A0A0B4J2B6 119 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 PDE5AO76074 875 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 ADRA2AP08913 450 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 IDO1P14902 403 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 NPR2P20594 1047 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 GIFP27352 417 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 CRISP3P54108 245 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 CEACAM16Q2WEN9 425 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 CARD17Q5XLA6 110 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 MSANTD1Q6ZTZ1 278 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 CARM1Q86X55 608 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 WDFY1Q8IWB7 410 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 ANKK1Q8NFD2 765 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 NUP37Q8NFH4 326 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 OR4F15Q8NGB8 312 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 MFSD8Q8NHS3 518 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 MAGEE2Q8TD90 523 aaPredicted RBP14.3□□□□□ -0.12
VARS-216ENST00000428445 MAL2Q969L2 176 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 TAAR8Q969N4 342 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 SLC35B4Q969S0 331 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 TPT1P8Q9HAU6 139 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 IFT52Q9Y366 437 aa14.3□□□□□ -0.12
VARS-216ENST00000428445 A0A0G2JPF8 293 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 TMEM247A6NEH6 219 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 HNRNPCL2B2RXH8 293 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 HNRNPCL3B7ZW38 293 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms