RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 FAM46AQ96IP4 442 aaKnown RBP13.5□□□□□ -0.25
VARS2-203ENST00000428017 PSD2Q9BQI7 771 aa13.5□□□□□ -0.25
VARS2-203ENST00000428017 BDH2Q9BUT1 245 aa13.5□□□□□ -0.25
VARS2-203ENST00000428017 BCO1Q9HAY6 547 aa13.5□□□□□ -0.25
VARS2-203ENST00000428017 SEC14L4Q9UDX3 406 aa13.5□□□□□ -0.25
VARS2-203ENST00000428017 IGKV3D-15A0A087WSY6 115 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 BLOC1S5-TXNDC5H3BN57 136 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 PLPP3O14495 311 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 RAMP1O60894 148 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 FZD7O75084 574 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 ENTPD5O75356 428 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 SMNDC1O75940 238 aaKnown RBP eCLIP13.49□□□□□ -0.253e-7■■□□□ 11.4
VARS2-203ENST00000428017 MAKP20794 623 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 AGTR1P30556 359 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 DNAJA1P31689 397 aaKnown RBP13.49□□□□□ -0.25
VARS2-203ENST00000428017 SLC9A3P48764 834 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 SLC16A1P53985 500 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 LSM11P83369 360 aaKnown RBP eCLIP13.49□□□□□ -0.253e-6■■□□□ 12.6
VARS2-203ENST00000428017 PUDPQ08623 228 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 FOXF2Q12947 444 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 PPP1R8Q12972 351 aaKnown RBP13.49□□□□□ -0.25
VARS2-203ENST00000428017 MICAQ29983 383 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 TMPRSS11FQ6ZWK6 438 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 OAFQ86UD1 273 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 MEX3DQ86XN8 651 aaKnown RBP13.49□□□□□ -0.25
VARS2-203ENST00000428017 UEVLDQ8IX04 471 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 ZNF808Q8N4W9 903 aaPredicted RBP13.49□□□□□ -0.25
VARS2-203ENST00000428017 OR9K2Q8NGE7 335 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 OR4C15Q8NGM1 316 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 OR6K3Q8NGY3 331 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 LIPHQ8WWY8 451 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 ZNF775Q96BV0 537 aaPredicted RBP13.49□□□□□ -0.25
VARS2-203ENST00000428017 OXGR1Q96P68 337 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 FUZQ9BT04 418 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 PIGMQ9H3S5 423 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 PROCRQ9UNN8 238 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 NOSIPQ9Y314 301 aaKnown RBP13.49□□□□□ -0.25
VARS2-203ENST00000428017 ESPL1Q14674 2120 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 ZGRF1Q86YA3 2104 aa13.49□□□□□ -0.25
VARS2-203ENST00000428017 SPENQ96T58 3664 aaKnown RBP13.49□□□□□ -0.25
VARS2-203ENST00000428017 ZNF716A6NP11 495 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 EEF1E1-BLOC1S5C9J1V9 151 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 C11orf98E9PRG8 122 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 EEF1E1O43324 174 aaKnown RBP13.48□□□□□ -0.25
VARS2-203ENST00000428017 AKAP8O43823 692 aaKnown RBP13.48□□□□□ -0.25
VARS2-203ENST00000428017 SERPINI2O75830 405 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 AGAP20933 346 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 LIMS1P48059 325 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 POU3F1Q03052 451 aaPredicted RBP13.48□□□□□ -0.25
VARS2-203ENST00000428017 SLC17A1Q14916 467 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 POU4F3Q15319 338 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 ATP6AP1Q15904 470 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 ANKDD1AQ495B1 522 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 STK32CQ86UX6 486 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 ZNF100Q8IYN0 542 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 KDM8Q8N371 416 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 ANKK1Q8NFD2 765 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 OR10G2Q8NGC3 310 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 OR13C2Q8NGS9 318 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 OR51A7Q8NH64 312 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 GNPDA2Q8TDQ7 276 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 GIPC3Q8TF64 312 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 SSC4DQ8WTU2 575 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 PARPBPQ9NWS1 579 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 VNN3Q9NY84 501 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 NOX1Q9Y5S8 564 aa13.48□□□□□ -0.25
VARS2-203ENST00000428017 TRAV27A0A087WT01 109 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 LOC102725191A0A1B0GVB3 256 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 UNC119BA6NIH7 251 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 FAM90A27PA6NNH2 459 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 MRPL33O75394 65 aaKnown RBP13.47□□□□□ -0.25
VARS2-203ENST00000428017 TNFSF13O75888 250 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 FPR3P25089 353 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 KIR2DL2P43627 348 aaPredicted RBP13.47□□□□□ -0.25
VARS2-203ENST00000428017 OMPP47874 163 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 P2RY4P51582 365 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 IST1P53990 364 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 LAPTM4AQ15012 233 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 SLC25A35Q3KQZ1 300 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 VWA1Q6PCB0 445 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 AAED1Q7RTV5 226 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 PXKQ7Z7A4 578 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 ZER1Q7Z7L7 766 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 AQP11Q8NBQ7 271 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 OR9Q2Q8NGE9 314 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 ITLN2Q8WWU7 325 aaPredicted RBP13.47□□□□□ -0.25
VARS2-203ENST00000428017 LRTOMTQ8WZ04 291 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 STARD4Q96DR4 205 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 LRRC46Q96FV0 321 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 C12orf49Q9H741 205 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 KCNJ16Q9NPI9 418 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 PDP1Q9P0J1 537 aaPredicted RBP13.47□□□□□ -0.25
VARS2-203ENST00000428017 FLVCR1Q9Y5Y0 555 aa13.47□□□□□ -0.25
VARS2-203ENST00000428017 GTF3C1Q12789 2109 aa13.46□□□□□ -0.25
VARS2-203ENST00000428017 A0A1W2PRG6 482 aa13.46□□□□□ -0.25
VARS2-203ENST00000428017 MS4A18H0YCH9 400 aa13.46□□□□□ -0.25
VARS2-203ENST00000428017 RRP9O43818 475 aaKnown RBP13.46□□□□□ -0.25
VARS2-203ENST00000428017 CLDN14O95500 239 aa13.46□□□□□ -0.25
VARS2-203ENST00000428017 HPRP00739 348 aa13.46□□□□□ -0.25
VARS2-203ENST00000428017 RPL4P36578 427 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms