RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 H1FNTQ75WM6 255 aaPredicted RBP18.17■□□□□ 0.5
HSPG2-205ENST00000427897 YTHDF3Q7Z739 585 aaKnown RBP18.17■□□□□ 0.5
HSPG2-205ENST00000427897 C17orf78Q8N4C9 275 aa18.17■□□□□ 0.5
HSPG2-205ENST00000427897 C1orf162Q8NEQ5 155 aaPredicted RBP18.17■□□□□ 0.5
HSPG2-205ENST00000427897 KBTBD8Q8NFY9 601 aa18.17■□□□□ 0.5
HSPG2-205ENST00000427897 SMAP2Q8WU79 429 aaPredicted RBP18.17■□□□□ 0.5
HSPG2-205ENST00000427897 TRMT61AQ96FX7 289 aaKnown RBP18.17■□□□□ 0.5
HSPG2-205ENST00000427897 PTDSS2Q9BVG9 487 aa18.17■□□□□ 0.5
HSPG2-205ENST00000427897 FAIMQ9NVQ4 179 aa18.17■□□□□ 0.5
HSPG2-205ENST00000427897 CISD1Q9NZ45 108 aaKnown RBP18.17■□□□□ 0.5
HSPG2-205ENST00000427897 B3GALT5Q9Y2C3 310 aa18.17■□□□□ 0.5
HSPG2-205ENST00000427897 ARL2BPQ9Y2Y0 163 aa18.17■□□□□ 0.5
HSPG2-205ENST00000427897 MAGED1Q9Y5V3 778 aaPredicted RBP18.17■□□□□ 0.5
HSPG2-205ENST00000427897 MED13LQ71F56 2210 aa18.17■□□□□ 0.5
HSPG2-205ENST00000427897 CPSF4LA6NMK7 179 aaKnown RBP18.16■□□□□ 0.5
HSPG2-205ENST00000427897 FTCDNL1E5RQL4 147 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 M0R082 166 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 FOSL1P15407 271 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 GRPRP30550 384 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 PTH2RP49190 550 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 SELENOPP49908 381 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 CDH12P55289 794 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 RABL3Q5HYI8 236 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 ENTPD8Q5MY95 495 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 HMBOX1Q6NT76 420 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 OR8J3Q8NGG0 315 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 ZNF417Q8TAU3 575 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 PROX1Q92786 737 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 NEUROG1Q92886 237 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 ZNF587Q96SQ5 575 aaPredicted RBP18.16■□□□□ 0.5
HSPG2-205ENST00000427897 RSPO3Q9BXY4 272 aaPredicted RBP18.16■□□□□ 0.5
HSPG2-205ENST00000427897 SLC25A15Q9Y619 301 aa18.16■□□□□ 0.5
HSPG2-205ENST00000427897 A0A0B4J2E0 115 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 A0A1B0GX12 115 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 FMO6PO60774 539 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 SLC43A1O75387 559 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 OR6A2O95222 327 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 IFNA14P01570 189 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 CD247P20963 164 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 PTNP21246 168 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 P2RY4P51582 365 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 CDH11P55287 796 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 ATP5J2P56134 94 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 RIPPLY3P57055 190 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 UBE2NP61088 152 aaKnown RBP18.15■□□□□ 0.5
HSPG2-205ENST00000427897 PMS2P3Q13401 168 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 SWT1Q5T5J6 900 aaKnown RBP18.15■□□□□ 0.5
HSPG2-205ENST00000427897 ERICH5Q6P6B1 374 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 ZNF613Q6PF04 617 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 TTC33Q6PID6 262 aaPredicted RBP18.15■□□□□ 0.5
HSPG2-205ENST00000427897 PRSS57Q6UWY2 283 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 EPHX4Q8IUS5 362 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 GPR137CQ8N3F9 429 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 Q96MF0 132 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 ARHGDIGQ99819 225 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 GSX2Q9BZM3 304 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 SLC17A5Q9NRA2 495 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 CORINQ9Y5Q5 1042 aa18.15■□□□□ 0.5
HSPG2-205ENST00000427897 UEVLDQ8IX04 471 aa18.14■□□□□ 0.49
HSPG2-205ENST00000427897 ANKS4BQ8N8V4 417 aa18.14■□□□□ 0.49
HSPG2-205ENST00000427897 GPR32P1Q8NGA4 272 aa18.14■□□□□ 0.49
HSPG2-205ENST00000427897 OR6T1Q8NGN1 323 aa18.14■□□□□ 0.49
HSPG2-205ENST00000427897 LILRB1Q8NHL6 650 aaPredicted RBP18.14■□□□□ 0.49
HSPG2-205ENST00000427897 C18orf12Q96KH6 178 aa18.14■□□□□ 0.49
HSPG2-205ENST00000427897 WFDC6Q9BQY6 131 aa18.14■□□□□ 0.49
HSPG2-205ENST00000427897 TMEM43Q9BTV4 400 aa18.14■□□□□ 0.49
HSPG2-205ENST00000427897 BDH2Q9BUT1 245 aa18.14■□□□□ 0.49
HSPG2-205ENST00000427897 NPAP1Q9NZP6 1156 aa18.14■□□□□ 0.49
HSPG2-205ENST00000427897 SEC14L4Q9UDX3 406 aa18.14■□□□□ 0.49
HSPG2-205ENST00000427897 BAG5Q9UL15 447 aa18.14■□□□□ 0.49
HSPG2-205ENST00000427897 RAI1Q7Z5J4 1906 aaPredicted RBP18.13■□□□□ 0.49
HSPG2-205ENST00000427897 IGKV1D-42A0A075B6H8 117 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 PDLIM1O00151 329 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 CHP2O43745 196 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 TPST2O60704 377 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 DCTN3O75935 186 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 AHCYP23526 432 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 CD40P25942 277 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 NRF1Q16656 503 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 C1QTNF12Q5T7M4 302 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 CCDC80Q76M96 950 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 OR6S1Q8NH40 331 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 ADAMTS16Q8TE57 1224 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 ALKBH3Q96Q83 286 aaPredicted RBP18.13■□□□□ 0.49
HSPG2-205ENST00000427897 KCNS3Q9BQ31 491 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 LINC00470Q9BZP3 86 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 FKRPQ9H9S5 495 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 ARMCX1Q9P291 453 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 RCE1Q9Y256 329 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 SH3GLB1Q9Y371 365 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 ATP23Q9Y6H3 246 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 F8P00451 2351 aa18.13■□□□□ 0.49
HSPG2-205ENST00000427897 TRAPPC13A5PLN9 417 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 ZNF726A6NNF4 738 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 HIST1H2ABP04908 130 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 ROR2Q01974 943 aaKnown RBP18.12■□□□□ 0.49
HSPG2-205ENST00000427897 VEZF1Q14119 521 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 HIKESHIQ53FT3 197 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 AGAP6Q5VW22 663 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 SEZ6L2Q6UXD5 910 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms