RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PATL1Q86TB9 770 aaKnown RBP16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 SLC30A8Q8IWU4 369 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 POMGNT2Q8NAT1 580 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 OR6S1Q8NH40 331 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 ZNF417Q8TAU3 575 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 OXGR1Q96P68 337 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 ZNF587Q96SQ5 575 aaPredicted RBP16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 C1QTNF6Q9BXI9 259 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 MRGBPQ9NV56 204 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 ARMCX1Q9P291 453 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 SLC13A4Q9UKG4 626 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 LAMP3Q9UQV4 416 aa16.08■□□□□ 0.16
SMARCAL1-205ENST00000425815 LOC102725191A0A1B0GVB3 256 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 BBIP1A8MTZ0 92 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 LRRN3E7EW58 273 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 HPRP00739 348 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 CD8AP01732 235 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 ZNF83P51522 516 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 MMEL1Q495T6 779 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 ENTPD8Q5MY95 495 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 NIPAL3Q6P499 406 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 ZNF613Q6PF04 617 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 RANBP3LQ86VV4 465 aaPredicted RBP16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 WDFY1Q8IWB7 410 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 C1orf162Q8NEQ5 155 aaPredicted RBP16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 SMAP2Q8WU79 429 aaPredicted RBP16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 MOGAT1Q96PD6 335 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 SH3GL1Q99961 368 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 B3GALT5Q9Y2C3 310 aa16.07■□□□□ 0.16
SMARCAL1-205ENST00000425815 MTORP42345 2549 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 ABCD4O14678 606 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 AIM2O14862 343 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 ARHGEF9O43307 516 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 ATP8B1O43520 1251 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 HLA-DOBP13765 273 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 FOSL1P15407 271 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 CD40P25942 277 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 CLDN17P56750 224 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 NCALDP61601 193 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 SPOCK1Q08629 439 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 SWT1Q5T5J6 900 aaKnown RBP16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 C17orf78Q8N4C9 275 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 RNF217Q8TC41 542 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 TMEM171Q8WVE6 324 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 FBXW5Q969U6 566 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 ECSITQ9BQ95 431 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 TMEM43Q9BTV4 400 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 PCDHAC1Q9H158 963 aa16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 CISD1Q9NZ45 108 aaKnown RBP16.06■□□□□ 0.16
SMARCAL1-205ENST00000425815 ACANP16112 2415 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 CPSF4LA6NMK7 179 aaKnown RBP16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 TRAF3IP2O43734 574 aaPredicted RBP16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 TMCC2O75069 709 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 ZNF43P17038 809 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 CDH2P19022 906 aaPredicted RBP16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 VEZF1Q14119 521 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 MAPRE2Q15555 327 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 HIKESHIQ53FT3 197 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 INTS11Q5TA45 600 aaKnown RBP16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 YTHDF3Q7Z739 585 aaKnown RBP16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 CIARTQ8N365 385 aaPredicted RBP16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 POU5F2Q8N7G0 328 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 ADPRHL1Q8NDY3 354 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 VANGL1Q8TAA9 524 aaPredicted RBP16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 ADAMTS16Q8TE57 1224 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 BCL2L2Q92843 193 aaPredicted RBP16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 SMR3AQ99954 134 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 LINC00470Q9BZP3 86 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 SELENONQ9NZV5 590 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 GMPR2Q9P2T1 348 aaKnown RBP16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 MAGED1Q9Y5V3 778 aaPredicted RBP16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 CAPN7Q9Y6W3 813 aa16.05■□□□□ 0.16
SMARCAL1-205ENST00000425815 NF1P21359 2839 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 E7EQL1 145 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 M0R1B8 84 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 SLC22A2O15244 555 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 CHP2O43745 196 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 PTAFRP25105 342 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 GTF2E2P29084 291 aaKnown RBP16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 RPS4XP62701 263 aaKnown RBP16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 TGFBR3Q03167 851 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 TMEM108Q6UXF1 575 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 OR1K1Q8NGR3 316 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 RCN3Q96D15 328 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 ZNF837Q96EG3 531 aaPredicted RBP16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 TXNDC15Q96J42 360 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 Q96MF0 132 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 ALKBH3Q96Q83 286 aaPredicted RBP16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 EPYCQ99645 322 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 PRSS27Q9BQR3 290 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 NELFAQ9H3P2 528 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 CXorf56Q9H5V9 222 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 GID8Q9NWU2 228 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 CMTM6Q9NX76 183 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 RCE1Q9Y256 329 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 AMDHD2Q9Y303 409 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 CORINQ9Y5Q5 1042 aa16.04■□□□□ 0.16
SMARCAL1-205ENST00000425815 OR6C65A6NJZ3 312 aa16.03■□□□□ 0.16
SMARCAL1-205ENST00000425815 RPL36A-HNRNPH2H7BZ11 118 aa16.03■□□□□ 0.16
SMARCAL1-205ENST00000425815 PLPP3O14495 311 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms