RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RIT1Q92963 219 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 SPACA7Q96KW9 195 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 GINS4Q9BRT9 223 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 IGFLR1Q9H665 355 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 NANSQ9NR45 359 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 OR5V1Q9UGF6 321 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 PILRAQ9UKJ1 303 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 FBXL21Q9UKT6 434 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 SCML1Q9UN30 329 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 PCDHGA5Q9Y5G8 931 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 MEIS3P1A6NDR6 274 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 TVP23AA6NH52 213 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 PRR19A6NJB7 356 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 PRR32B1ATL7 298 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 CYR61O00622 381 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 CTDSPLO15194 276 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 GMFGO60234 142 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 CREBL2O60519 120 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 PRAF2O60831 178 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 TGM6O95932 706 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 AK1P00568 194 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 DPP4P27487 766 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ADH7P40394 386 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 LSSP48449 732 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 PTH2RP49190 550 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 P2RX1P51575 399 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ART1P52961 327 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 PSG6Q00889 435 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 GAS6Q14393 721 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 KIR2DS3Q14952 304 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 C1orf53Q5VUE5 145 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 CSNK1A1LQ8N752 337 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 OR9A4Q8NGU2 314 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 BADQ92934 168 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 MARVELD3Q96A59 401 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 MRPL48Q96GC5 212 aaKnown RBP6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 RBM18Q96H35 190 aaKnown RBP6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 RADILQ96JH8 1075 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 OR1F2PQ96R84 312 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 GAL3ST1Q99999 423 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 SLITRK2Q9H156 845 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 HRASLS2Q9NWW9 162 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 LRIT1Q9P2V4 623 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 FOXJ3Q9UPW0 622 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 OR10H1Q9Y4A9 318 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ENTPD2Q9Y5L3 495 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 CHD9Q3L8U1 2897 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 FXYD6-FXYD2A0A087WZ82 144 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 H7C1C5 153 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 GPRIN2O60269 458 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 CSTAP01040 98 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 CTSBP07858 339 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 FBXO45P0C2W1 286 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ACSM4P0C7M7 580 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 NFYAP23511 347 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ITPKBP27987 946 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 AQP2P41181 271 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ADPRHP54922 357 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 LCN6P62502 163 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 YOD1Q5VVQ6 348 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 PWWP2BQ6NUJ5 590 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 OR6V1Q8N148 313 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 MYADMQ96S97 322 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 NKX3-1Q99801 234 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ALG12Q9BV10 488 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 FXYD6Q9H0Q3 95 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 GPN1Q9HCN4 374 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 RXFP3Q9NSD7 469 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 PIPOXQ9P0Z9 390 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 ICAM5Q9UMF0 924 aa6.89□□□□□ -1.31
SMARCC1-202ENST00000425518 A0A1B0GUH1 482 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 NUPL2O15504 423 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 NKX2-2O95096 273 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 F13BP05160 661 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 TYRP1P17643 537 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 C4BPBP20851 252 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 PPM1FP49593 454 aaPredicted RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 PLA2G7Q13093 441 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 BTN1A1Q13410 526 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 CBFBQ13951 182 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 KCNAB1Q14722 419 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF542PQ5EBM4 170 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 LIPNQ5VXI9 398 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ZCCHC12Q6PEW1 402 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 FAM198BQ6UWH4 519 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 UNQ9370/PRO34162Q6UXP9 181 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 GLDNQ6ZMI3 551 aaPredicted RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 FRMD1Q8N878 549 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 RCBTB1Q8NDN9 531 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 OR4C3Q8NH37 302 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ZDHHC1Q8WTX9 485 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 RGP1Q92546 391 aaPredicted RBP6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 LYRM4Q9HD34 91 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 TMEM138Q9NPI0 162 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 DTX4Q9Y2E6 619 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 AUP1Q9Y679 476 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 NAP1L6A6NFF2 107 aa6.88□□□□□ -1.31
SMARCC1-202ENST00000425518 ANXA2P2A6NMY6 339 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms