RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 UPK3AO75631 287 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 PNPP00491 289 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 NUDT17P0C025 328 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 ALDH3A1P30838 453 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 GLRXP35754 106 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 LMO4P61968 165 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 SNTB2Q13425 540 aaKnown RBP13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 AWAT1Q58HT5 328 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 MRPL2Q5T653 305 aaKnown RBP13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 PRAMEF8Q5VWM4 474 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 PRAMEF7Q5VXH5 474 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 WBP2NLQ6ICG8 309 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 NIPAL3Q6P499 406 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 ZNF627Q7L945 461 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 LRRC34Q8IZ02 419 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 EIF1ADQ8N9N8 165 aaKnown RBP13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 MFSD8Q8NHS3 518 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 LRRC37BQ96QE4 947 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 ZNF747Q9BV97 191 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 ZNF416Q9BWM5 594 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 G6PC2Q9NQR9 355 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 REV1Q9UBZ9 1251 aa13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 MARCOQ9UEW3 520 aaPredicted RBP13.39□□□□□ -0.27
RPUSD3-204ENST00000424438 TRRAPQ9Y4A5 3859 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 A0A096LPE4 126 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 LOC102725191A0A1B0GVB3 256 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 A0A1W2PPZ6 126 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 CDHR4A6H8M9 788 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 FTCDNL1E5RQL4 147 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 J3QLI3 93 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 CHRM4P08173 479 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 CELA3BP08861 270 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 FAM153BP0C7A2 387 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 IL7RP16871 459 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 ACAA2P42765 397 aaKnown RBP13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 RPS23P62266 143 aaKnown RBP13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 TUBA1BP68363 451 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 TUBA4AP68366 448 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 ARF1P84077 181 aaKnown RBP13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 C1orf140Q5VVS0 124 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 SHISA2Q6UWI4 295 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 C1orf229Q6ZS94 237 aaPredicted RBP13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 TUBA1AQ71U36 451 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 C1QL2Q7Z5L3 287 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 C17orf53Q8N3J3 647 aaPredicted RBP13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 APOPT1Q96IL0 206 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 GPR35Q9HC97 309 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 SLC52A3Q9NQ40 469 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 B3GNT2Q9NY97 397 aa13.38□□□□□ -0.27
RPUSD3-204ENST00000424438 ZNF99A8MXY4 864 aaPredicted RBP13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 LYNX1G3V0Z9 82 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 TMPRSS2O15393 492 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 SLC43A1O75387 559 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 RP2O75695 350 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 LYNX1P0DP58 116 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 ARRB2P32121 409 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 MYBPC1Q00872 1141 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 TUSC1Q2TAM9 212 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 PEX5LQ8IYB4 626 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 C4orf33Q8N1A6 199 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 RIBC1Q8N443 379 aaPredicted RBP13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 ANKFN1Q8N957 763 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 CCDC115Q96NT0 180 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 SLC35A5Q9BS91 424 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 MRPL37Q9BZE1 423 aaKnown RBP13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 DPY30Q9C005 99 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 ADPRHL2Q9NX46 363 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 ZDHHC2Q9UIJ5 367 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 BTNL2Q9UIR0 455 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 ZNF346Q9UL40 294 aaKnown RBP13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 DSPPQ9NZW4 1301 aa13.37□□□□□ -0.27
RPUSD3-204ENST00000424438 SH3PXD2BA1X283 911 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 AKAP8O43823 692 aaKnown RBP13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 SKAP2O75563 359 aaPredicted RBP13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 HPXP02790 462 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 ZNF35P13682 527 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 ZNF43P17038 809 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 GATA3P23771 443 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 CHI3L1P36222 383 aaPredicted RBP13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 CLNS1AP54105 237 aaKnown RBP13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 COPZ1P61923 177 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 LRRC74AQ0VAA2 488 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 FOXL1Q12952 345 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 SYPL1Q16563 259 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 FXNQ16595 210 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 MSMPQ1L6U9 139 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 RNF220Q5VTB9 566 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 C5orf46Q6UWT4 87 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 ZCCHC23Q6ZST2 131 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 MDP1Q86V88 176 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 LRRC17Q8N6Y2 441 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 TRIML2Q8N7C3 387 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 PIK3C3Q8NEB9 887 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 AGR3Q8TD06 166 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 SLC35B4Q969S0 331 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 ZNF75AQ96N20 296 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 OXGR1Q96P68 337 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 TPK1Q9H3S4 243 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 CRLF2Q9HC73 371 aa13.36□□□□□ -0.27
RPUSD3-204ENST00000424438 ZNF275Q9NSD4 429 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms