RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 A0A087WUJ7 227 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 B4DXG7 233 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 ZNF264O43296 627 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 ZNF217O75362 1048 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 GSTT2P0CG29 244 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 GSTT2BP0CG30 244 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 FBLP22087 321 aaKnown RBP10.86□□□□□ -0.67
PTPRN-204ENST00000423636 MYL9P24844 172 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 FASLGP48023 281 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 AGFG1P52594 562 aaKnown RBP10.86□□□□□ -0.67
PTPRN-204ENST00000423636 RPS15P62841 145 aaKnown RBP10.86□□□□□ -0.67
PTPRN-204ENST00000423636 CORO6Q6QEF8 472 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 LRRN1Q6UXK5 716 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 WDFY1Q8IWB7 410 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 OR6C4Q8NGE1 309 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 MAFAQ8NHW3 353 aaPredicted RBP10.86□□□□□ -0.67
PTPRN-204ENST00000423636 ZNF775Q96BV0 537 aaPredicted RBP10.86□□□□□ -0.67
PTPRN-204ENST00000423636 ALG12Q9BV10 488 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 SP140LQ9H930 580 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 CPNE5Q9HCH3 593 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 PAQR5Q9NXK6 330 aaPredicted RBP10.86□□□□□ -0.67
PTPRN-204ENST00000423636 EML6Q6ZMW3 1958 aa10.86□□□□□ -0.67
PTPRN-204ENST00000423636 J3QRE1 110 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 IMPDH2P12268 514 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 NXPH1P58417 271 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 DGCR2P98153 550 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 SLC25A30Q5SVS4 291 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 PHF19Q5T6S3 580 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 AGAP6Q5VW22 663 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 OR6V1Q8N148 313 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 YIPF7Q8N8F6 280 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 UPRTQ96BW1 309 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 PGLYRP3Q96LB9 341 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 AGAP4Q96P64 663 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 LMF2Q9BU23 707 aaKnown RBP10.85□□□□□ -0.67
PTPRN-204ENST00000423636 ANKRD19PQ9H560 264 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 ANKRD10Q9NXR5 420 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 COLQQ9Y215 455 aaPredicted RBP10.85□□□□□ -0.67
PTPRN-204ENST00000423636 IQCMA0A1B0GVH7 501 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 ISPDA4D126 451 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 IFNGP01579 166 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 TMIGD3P0DMS9 266 aaPredicted RBP10.85□□□□□ -0.67
PTPRN-204ENST00000423636 APEHP13798 732 aaKnown RBP10.85□□□□□ -0.67
PTPRN-204ENST00000423636 ADH7P40394 386 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 EVX1P49640 407 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 HSD11B2P80365 405 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 TATDN3Q17R31 274 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 SLC6A19Q695T7 634 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 SFRP4Q6FHJ7 346 aaPredicted RBP10.85□□□□□ -0.67
PTPRN-204ENST00000423636 PLET1Q6UQ28 207 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 ZNF574Q6ZN55 896 aaPredicted RBP10.85□□□□□ -0.67
PTPRN-204ENST00000423636 NCCRP1Q6ZVX7 275 aaPredicted RBP10.85□□□□□ -0.67
PTPRN-204ENST00000423636 ARL5BQ96KC2 179 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 CNN2Q99439 309 aaKnown RBP10.85□□□□□ -0.67
PTPRN-204ENST00000423636 G6PC3Q9BUM1 346 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 SLC2A4RGQ9NR83 387 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 UBQLN4Q9NRR5 601 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 NCDNQ9UBB6 729 aa10.85□□□□□ -0.67
PTPRN-204ENST00000423636 ADAMTS9Q9P2N4 1935 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 ZFPL1O95159 310 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 DDAH2O95865 285 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 MT-ND4P03905 459 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 CXCR1P25024 350 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 ABCD3P28288 659 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 ETV6P41212 452 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 FMODQ06828 376 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 FUT7Q11130 342 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 BCL2L15Q5TBC7 163 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 ZNF550Q7Z398 422 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 NANOGNBQ7Z5D8 188 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 LINC00346Q8IVM7 164 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 OMA1Q96E52 524 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 MICU1Q9BPX6 476 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 MRPS18AQ9NVS2 196 aaKnown RBP10.84□□□□□ -0.67
PTPRN-204ENST00000423636 GRHPRQ9UBQ7 328 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 KCNG2Q9UJ96 466 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 DYRK3O43781 588 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 AKR7A3O95154 331 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 SLC2A5P22732 501 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 GPR50Q13585 617 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 KLHL26Q53HC5 615 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 CEP78Q5JTW2 689 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 PRAMEF20Q5VT98 475 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 ARSKQ6UWY0 536 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 GDPGP1Q6ZNW5 385 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 RNF113BQ8IZP6 322 aaKnown RBP10.84□□□□□ -0.67
PTPRN-204ENST00000423636 OR52N1Q8NH53 320 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 ZNF721Q8TF20 911 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 HLA-CQ95604 372 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 CYYR1Q96J86 154 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 SLC22A11Q9NSA0 550 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 MED29Q9NX70 200 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 SLC22A13Q9Y226 551 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 PTPRZ1P23471 2315 aaPredicted RBP10.84□□□□□ -0.67
PTPRN-204ENST00000423636 TMEM131Q92545 1883 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 OR6C70A6NIJ9 312 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 RORAP35398 523 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 ARFIP1P53367 373 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 BIKQ13323 160 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 SMAD4Q13485 552 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms