RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SLC15A3Q8IY34 581 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 WDR31Q8NA23 367 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 GTPBP3Q969Y2 492 aaKnown RBP13.33□□□□□ -0.28
USB1-202ENST00000423271 HOPXQ9BPY8 73 aaPredicted RBP13.33□□□□□ -0.28
USB1-202ENST00000423271 TRAF4Q9BUZ4 470 aaPredicted RBP13.33□□□□□ -0.28
USB1-202ENST00000423271 SF3B5Q9BWJ5 86 aaKnown RBP13.33□□□□□ -0.28
USB1-202ENST00000423271 TAPBPLQ9BX59 468 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 C1QTNF6Q9BXI9 259 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 AMBRA1Q9C0C7 1298 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 ARMC7Q9H6L4 198 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 PARPBPQ9NWS1 579 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 GMPR2Q9P2T1 348 aaKnown RBP13.33□□□□□ -0.28
USB1-202ENST00000423271 ALPK2Q86TB3 2170 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 ABCA2Q9BZC7 2435 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 FAM171A2A8MVW0 826 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 FTCDNL1E5RQL4 147 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 M0R1B8 84 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 NDUFS7O75251 213 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 CD40P25942 277 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 HTR2AP28223 471 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 SLC7A2P52569 658 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 PCBP3P57721 371 aaKnown RBP13.32□□□□□ -0.28
USB1-202ENST00000423271 EGR4Q05215 589 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 LGALS3BPQ08380 585 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 TNK1Q13470 666 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 GLIPR1L2Q4G1C9 344 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 OR7E24Q6IFN5 339 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 TMEM108Q6UXF1 575 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 B3GLCTQ6Y288 498 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 SSX8Q7RTT4 187 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 AAED1Q7RTV5 226 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 ARPINQ7Z6K5 226 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 ZNF607Q96SK3 696 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 PTDSS2Q9BVG9 487 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 SLCO5A1Q9H2Y9 848 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 SLC17A5Q9NRA2 495 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 SEC14L4Q9UDX3 406 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 PRDM4Q9UKN5 801 aa13.32□□□□□ -0.28
USB1-202ENST00000423271 HEATR1Q9H583 2144 aaKnown RBP13.31□□□□□ -0.28
USB1-202ENST00000423271 FAM220BPB1ANY3 271 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 E7EQL1 145 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 NME4O00746 187 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 TPST1O60507 370 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 AHSA1O95433 338 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 IGHV4-39P01824 125 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 MPGP29372 298 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 PRKAR1BP31321 381 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 RPS5P46782 204 aaKnown RBP13.31□□□□□ -0.28
USB1-202ENST00000423271 SELENOPP49908 381 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 PSME3P61289 254 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 DMTNQ08495 405 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 VEZF1Q14119 521 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 KRT72Q14CN4 511 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 CLEC12BQ2HXU8 276 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 KLHL17Q6TDP4 642 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 DTX2Q86UW9 622 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 EPHX4Q8IUS5 362 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 SLC30A8Q8IWU4 369 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 C1orf162Q8NEQ5 155 aaPredicted RBP13.31□□□□□ -0.28
USB1-202ENST00000423271 STK35Q8TDR2 534 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 SLC35B4Q969S0 331 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 SLC25A36Q96CQ1 311 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 KTI12Q96EK9 354 aaPredicted RBP13.31□□□□□ -0.28
USB1-202ENST00000423271 TRMT61AQ96FX7 289 aaKnown RBP13.31□□□□□ -0.28
USB1-202ENST00000423271 SPATA5L1Q9BVQ7 753 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 PRR14Q9BWN1 585 aa13.31□□□□□ -0.28
USB1-202ENST00000423271 GDF2Q9UK05 429 aaPredicted RBP13.31□□□□□ -0.28
USB1-202ENST00000423271 SONP18583 2426 aaKnown RBP13.31□□□□□ -0.28
USB1-202ENST00000423271 IGKV1D-42A0A075B6H8 117 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 A0A1B0GWA3 101 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 ELOA3DA6NLF2 546 aaPredicted RBP13.3□□□□□ -0.28
USB1-202ENST00000423271 MFN2O95140 757 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 OPN1SWP03999 348 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 PNMTP11086 282 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 CDH2P19022 906 aaPredicted RBP13.3□□□□□ -0.28
USB1-202ENST00000423271 PTAFRP25105 342 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 ACVR1BP36896 505 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 LIPEQ05469 1076 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 ELOA3BQ3SY89 546 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 HIKESHIQ53FT3 197 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 TMEM225Q6GV28 225 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 ERICH5Q6P6B1 374 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 DHRS4L2Q6PKH6 230 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 SLC22A25Q6T423 547 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 C6orf89Q6UWU4 347 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 CREB3L2Q70SY1 520 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 LINGO2Q7L985 606 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 ARMC8Q8IUR7 673 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 KDM8Q8N371 416 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 C17orf78Q8N4C9 275 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 POMGNT2Q8NAT1 580 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 SMYD1Q8NB12 490 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 MAPK1IP1LQ8NDC0 245 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 ELOA3Q8NG57 546 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 OR2T12Q8NG77 320 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 MFSD8Q8NHS3 518 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 ALKBH3Q96Q83 286 aaPredicted RBP13.3□□□□□ -0.28
USB1-202ENST00000423271 WFDC6Q9BQY6 131 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 ALG2Q9H553 416 aa13.3□□□□□ -0.28
USB1-202ENST00000423271 RPS6KB2Q9UBS0 482 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms