RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 MYEF2Q9P2K5 600 aaKnown RBP11.11□□□□□ -0.63
LINC00339-203ENST00000420503 B3GAT1Q9P2W7 334 aa11.11□□□□□ -0.63
LINC00339-203ENST00000420503 LGALS13Q9UHV8 139 aa11.11□□□□□ -0.63
LINC00339-203ENST00000420503 MEGF8Q7Z7M0 2845 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 CDHR4A6H8M9 788 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 FTCDNL1E5RQL4 147 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 E9PBE3 544 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 TYROBPO43914 113 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 NPIPB7O75200 414 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 ZNF432O94892 652 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 HPXP02790 462 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 NR2F1P10589 423 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 IL7RP16871 459 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 EGR1P18146 543 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 CBLP22681 906 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 EGR4Q05215 589 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 MAD2L1Q13257 205 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-203ENST00000420503 SNTB2Q13425 540 aaKnown RBP11.1□□□□□ -0.63
LINC00339-203ENST00000420503 CHI3L2Q15782 390 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 ELFN2Q5R3F8 820 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 COMTD1Q86VU5 262 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 LRP11Q86VZ4 500 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 CMIPQ8IY22 773 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 NUP37Q8NFH4 326 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 CLDND2Q8NHS1 167 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 UBASH3BQ8TF42 649 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 KTI12Q96EK9 354 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-203ENST00000420503 MRPL37Q9BZE1 423 aaKnown RBP11.1□□□□□ -0.63
LINC00339-203ENST00000420503 ZNF442Q9H7R0 627 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 PNPOQ9NVS9 261 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 FZR1Q9UM11 496 aa11.1□□□□□ -0.63
LINC00339-203ENST00000420503 A8MVM7 634 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-203ENST00000420503 NCR1O76036 304 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 AVPP01185 164 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 HLA-HP01893 362 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 DBIP07108 87 aaKnown RBP11.09□□□□□ -0.63
LINC00339-203ENST00000420503 ETFAP13804 333 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 CBR1P16152 277 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 COL8A2P25067 703 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 FKBP2P26885 142 aaKnown RBP11.09□□□□□ -0.63
LINC00339-203ENST00000420503 S100A3P33764 101 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 SERPINB5P36952 375 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 ALDH3B1P43353 468 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 RPS5P46782 204 aaKnown RBP11.09□□□□□ -0.63
LINC00339-203ENST00000420503 IFFO1Q0D2I5 559 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 HNRNPA0Q13151 305 aaKnown RBP11.09□□□□□ -0.63
LINC00339-203ENST00000420503 CEACAM16Q2WEN9 425 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 ANXA8L1Q5VT79 327 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 CARD17Q5XLA6 110 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-203ENST00000420503 ZNF621Q6ZSS3 439 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 NUDCD3Q8IVD9 361 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 OR52P1PQ8NH57 321 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 OIT3Q8WWZ8 545 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 YIPF5Q969M3 257 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 ZIM3Q96PE6 472 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 PANX1Q96RD7 426 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 SYT3Q9BQG1 590 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 TAPBPLQ9BX59 468 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 CRLF2Q9HC73 371 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 GPR35Q9HC97 309 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 TREM2Q9NZC2 230 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 BTNL2Q9UIR0 455 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 ZNF443Q9Y2A4 671 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-203ENST00000420503 DSPPQ9NZW4 1301 aa11.09□□□□□ -0.63
LINC00339-203ENST00000420503 ERLIN1O75477 346 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 SNUPNO95149 360 aaKnown RBP11.08□□□□□ -0.64
LINC00339-203ENST00000420503 HPRP00739 348 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 BCHEP06276 602 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 NUDT7P0C024 238 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 HLA-DOBP13765 273 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 CAPZA2P47755 286 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 DVL1P1P54792 670 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-203ENST00000420503 AQP5P55064 265 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 ABCE1P61221 599 aaKnown RBP11.08□□□□□ -0.64
LINC00339-203ENST00000420503 TNFAIP8L3Q5GJ75 292 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 WBP2NLQ6ICG8 309 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 ABHD12BQ7Z5M8 362 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-203ENST00000420503 ZNF540Q8NDQ6 660 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 OR4F15Q8NGB8 312 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 MAGEE2Q8TD90 523 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-203ENST00000420503 NEU4Q8WWR8 484 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-203ENST00000420503 HPS1Q92902 700 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 VPS33AQ96AX1 596 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 LINC00470Q9BZP3 86 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 MTHFD2LQ9H903 347 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-203ENST00000420503 HIF1ANQ9NWT6 349 aa11.08□□□□□ -0.64
LINC00339-203ENST00000420503 IGKV1D-42A0A075B6H8 117 aa11.07□□□□□ -0.64
LINC00339-203ENST00000420503 M0R082 166 aa11.07□□□□□ -0.64
LINC00339-203ENST00000420503 M0R3G1 203 aa11.07□□□□□ -0.64
LINC00339-203ENST00000420503 SDHDO14521 159 aa11.07□□□□□ -0.64
LINC00339-203ENST00000420503 TRAF3IP2O43734 574 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-203ENST00000420503 SERPINE1P05121 402 aa11.07□□□□□ -0.64
LINC00339-203ENST00000420503 TFPTP0C1Z6 253 aa11.07□□□□□ -0.64
LINC00339-203ENST00000420503 LBPP18428 481 aa11.07□□□□□ -0.64
LINC00339-203ENST00000420503 BGNP21810 368 aa11.07□□□□□ -0.64
LINC00339-203ENST00000420503 PIGFQ07326 219 aa11.07□□□□□ -0.64
LINC00339-203ENST00000420503 DAG1Q14118 895 aa11.07□□□□□ -0.64
LINC00339-203ENST00000420503 MPP2Q14168 576 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms