RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ZNF43P17038 809 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 COMPP49747 757 aaPredicted RBP8.66□□□□□ -1.02
MDC1-202ENST00000416571 CLNS1AP54105 237 aaKnown RBP8.66□□□□□ -1.02
MDC1-202ENST00000416571 CLDN17P56750 224 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 TXNL4AP83876 142 aaKnown RBP8.66□□□□□ -1.02
MDC1-202ENST00000416571 ARF1P84077 181 aaKnown RBP8.66□□□□□ -1.02
MDC1-202ENST00000416571 BNIP2Q12982 314 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 PDCD2Q16342 344 aaPredicted RBP8.66□□□□□ -1.02
MDC1-202ENST00000416571 SLC9B1Q4ZJI4 515 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 C1orf140Q5VVS0 124 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 REP15Q6BDI9 236 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 WBP2NLQ6ICG8 309 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 LINGO2Q7L985 606 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 MYPOPQ86VE0 399 aaPredicted RBP8.66□□□□□ -1.02
MDC1-202ENST00000416571 EPHX4Q8IUS5 362 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 CCDC36Q8IYA8 594 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 ANKK1Q8NFD2 765 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 CLDND2Q8NHS1 167 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 TCP10LQ8TDR4 215 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 TESCQ96BS2 214 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 SLC25A36Q96CQ1 311 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 PANX1Q96RD7 426 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 NELFAQ9H3P2 528 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 AKTIPQ9H8T0 292 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 CACYBPQ9HB71 228 aaKnown RBP8.66□□□□□ -1.02
MDC1-202ENST00000416571 NOX3Q9HBY0 568 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 USP22Q9UPT9 525 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 RCE1Q9Y256 329 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 SPEF1Q9Y4P9 236 aa8.66□□□□□ -1.02
MDC1-202ENST00000416571 TENM1Q9UKZ4 2725 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 TMEM129A0AVI4 362 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 FAM157AC9JC47 383 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 E9PBE3 544 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 RPL36A-HNRNPH2H7BZ11 118 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 SYNGR3O43761 229 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 AKAP8O43823 692 aaKnown RBP8.65□□□□□ -1.02
MDC1-202ENST00000416571 TFP02787 698 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 NUDT17P0C025 328 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 TFPTP0C1Z6 253 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 GKN3PP0CG01 181 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 EGR1P18146 543 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 TCN1P20061 433 aaPredicted RBP8.65□□□□□ -1.02
MDC1-202ENST00000416571 RPS4Y1P22090 263 aaKnown RBP8.65□□□□□ -1.02
MDC1-202ENST00000416571 ACHEP22303 614 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 ARRB2P32121 409 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 S100A3P33764 101 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 P2RY4P51582 365 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 POU3F1Q03052 451 aaPredicted RBP8.65□□□□□ -1.02
MDC1-202ENST00000416571 C1DQ13901 141 aaKnown RBP8.65□□□□□ -1.02
MDC1-202ENST00000416571 CASP8Q14790 479 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 CEACAM16Q2WEN9 425 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 LIN52Q52LA3 116 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 SPANXN4Q5MJ08 99 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 FAHD2BQ6P2I3 314 aaPredicted RBP8.65□□□□□ -1.02
MDC1-202ENST00000416571 MDP1Q86V88 176 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 KDM8Q8N371 416 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 OR52P1PQ8NH57 321 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 OR51F2Q8NH61 342 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 FAM216AQ8WUB2 273 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 MRPL24Q96A35 216 aaKnown RBP8.65□□□□□ -1.02
MDC1-202ENST00000416571 FAHD2AQ96GK7 314 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 LRRC37BQ96QE4 947 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 RBM4Q9BWF3 364 aaKnown RBP8.65□□□□□ -1.02
MDC1-202ENST00000416571 ARMC7Q9H6L4 198 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 RLIMQ9NVW2 624 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 REV1Q9UBZ9 1251 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 PRDM4Q9UKN5 801 aa8.65□□□□□ -1.02
MDC1-202ENST00000416571 TMEM89A2RUT3 159 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 CDHR4A6H8M9 788 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 CCDC154A6NI56 674 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 PPIHO43447 177 aaKnown RBP8.64□□□□□ -1.03
MDC1-202ENST00000416571 SEC14L2O76054 403 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 PNPP00491 289 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 PNMTP11086 282 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 EPHA1P21709 976 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 NR4A1P22736 598 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 RPS5P46782 204 aaKnown RBP8.64□□□□□ -1.03
MDC1-202ENST00000416571 LIMS1P48059 325 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 EVX1P49640 407 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 HILS1P60008 231 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 RPS23P62266 143 aaKnown RBP8.64□□□□□ -1.03
MDC1-202ENST00000416571 GALK2Q01415 458 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 LARS2Q15031 903 aaKnown RBP8.64□□□□□ -1.03
MDC1-202ENST00000416571 TRMT5Q32P41 509 aaKnown RBP8.64□□□□□ -1.03
MDC1-202ENST00000416571 ZNF311Q5JNZ3 666 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 GKAP1Q5VSY0 366 aaPredicted RBP8.64□□□□□ -1.03
MDC1-202ENST00000416571 ATG16L1Q676U5 607 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 HIST2H2BDQ6DRA6 164 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 ZNF836Q6ZNA1 936 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 ZNF621Q6ZSS3 439 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 PEG10Q86TG7 708 aaKnown RBP8.64□□□□□ -1.03
MDC1-202ENST00000416571 VRK2Q86Y07 508 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 LRRC34Q8IZ02 419 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 RIBC1Q8N443 379 aaPredicted RBP8.64□□□□□ -1.03
MDC1-202ENST00000416571 PIK3C3Q8NEB9 887 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 MFSD8Q8NHS3 518 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 PNPT1Q8TCS8 783 aaKnown RBP8.64□□□□□ -1.03
MDC1-202ENST00000416571 MGARPQ8TDB4 240 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 STK35Q8TDR2 534 aa8.64□□□□□ -1.03
MDC1-202ENST00000416571 RDH5Q92781 318 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms