RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 GSX2Q9BZM3 304 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 ULBP3Q9BZM4 244 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 ISG20L2Q9H9L3 353 aaKnown RBP11.96□□□□□ -0.5
SCN1B-202ENST00000415950 ELOVL3Q9HB03 270 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 NOX4Q9NPH5 578 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 MBD1Q9UIS9 605 aaPredicted RBP11.96□□□□□ -0.5
SCN1B-202ENST00000415950 RUNX3Q13761 415 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 ABI3BPQ7Z7G0 1075 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF440Q8IYI8 595 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 OR52E1Q8NGJ3 308 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 ABHD5Q8WTS1 349 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 SLC38A1Q9H2H9 487 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 PLEK2Q9NYT0 353 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 HHLA2Q9UM44 414 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 TMEM269A0A1B0GVZ9 245 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 C17orf105B2RV13 164 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 LILRB5O75023 590 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 GNB3P16520 340 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 NFYAP23511 347 aaPredicted RBP11.95□□□□□ -0.5
SCN1B-202ENST00000415950 CDK2P24941 298 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 EMP2P54851 167 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 KDM8Q8N371 416 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 OR52R1Q8NGF1 315 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 OR5D18Q8NGL1 313 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 NEURL3Q96EH8 262 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 SENP5Q96HI0 755 aaPredicted RBP11.95□□□□□ -0.5
SCN1B-202ENST00000415950 OR5B2Q96R09 309 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 NUDT22Q9BRQ3 303 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 GABARAPL3Q9BY60 117 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 PLA2G12AQ9BZM1 189 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF160Q9HCG1 818 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 ACTR10Q9NZ32 417 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 OR5K4A6NMS3 321 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 ADAMTS4O75173 837 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 MED6O75586 246 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 SYNGR4O95473 234 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 CD6P30203 668 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 PRKAR1BP31321 381 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 OR7A5Q15622 319 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF765Q7L2R6 523 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 CALHM3Q86XJ0 350 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 UBTD2Q8WUN7 234 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 AMDHD1Q96NU7 426 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 RETREG1Q9H6L5 497 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 PLEKHA3Q9HB20 300 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 EXO1Q9UQ84 846 aaKnown RBP11.95□□□□□ -0.5
SCN1B-202ENST00000415950 AKAP6Q13023 2319 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 PHYHO14832 338 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 CHRM4P08173 479 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 CD53P19397 219 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 B4GALNT1Q00973 533 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 PRDX1Q06830 199 aaKnown RBP11.95□□□□□ -0.5
SCN1B-202ENST00000415950 IDO2Q6ZQW0 420 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 UEVLDQ8IX04 471 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF100Q8IYN0 542 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 OR1S1Q8NH92 325 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 TMEM106AQ96A25 262 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 TRMT2BQ96GJ1 504 aaKnown RBP11.95□□□□□ -0.5
SCN1B-202ENST00000415950 FCRL1Q96LA6 429 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 PLEKHM1Q9Y4G2 1056 aa11.95□□□□□ -0.5
SCN1B-202ENST00000415950 A0A1W2PS29 197 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 SLC6A12P48065 614 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF362Q5T0B9 420 aaPredicted RBP11.94□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF704Q6ZNC4 412 aaPredicted RBP11.94□□□□□ -0.5
SCN1B-202ENST00000415950 APH1BQ8WW43 257 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 PDXPQ96GD0 296 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 NICN1Q9BSH3 213 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 TMEM38AQ9H6F2 299 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 ADAMTS7Q9UKP4 1686 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 ZNFX1Q9P2E3 1918 aaKnown RBP11.94□□□□□ -0.5
SCN1B-202ENST00000415950 TRDV1A0A1B0GX56 115 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 JMJD7P0C870 316 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 RPS2P15880 293 aaKnown RBP11.94□□□□□ -0.5
SCN1B-202ENST00000415950 CD79BP40259 229 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 EVX1P49640 407 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 TOR2AQ5JU69 321 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 GPR139Q6DWJ6 353 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 TCEAL8Q8IYN2 117 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 ADGRF3Q8IZF5 1079 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 IL17RCQ8NAC3 791 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 ZBTB44Q8NCP5 570 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 OR13C9Q8NGT0 318 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 PFN4Q8NHR9 129 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 RBPMSQ93062 196 aaKnown RBP11.94□□□□□ -0.5
SCN1B-202ENST00000415950 PELI2Q9HAT8 420 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 SPATA6Q9NWH7 488 aaPredicted RBP11.94□□□□□ -0.5
SCN1B-202ENST00000415950 NPAP1Q9NZP6 1156 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 SLC35A3Q9Y2D2 325 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 DOCK5Q9H7D0 1870 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 HMGN4O00479 90 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 TXNDC12O95881 172 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 NME2P22392 152 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 NTSR1P30989 418 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 CX3CR1P49238 355 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF33BQ06732 778 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 GPR18Q14330 331 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 TMEM64Q6YI46 380 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 OR51Q1Q8NH59 317 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 ZG16BQ96DA0 208 aa11.94□□□□□ -0.5
SCN1B-202ENST00000415950 INSM2Q96T92 566 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms