RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 POU1F1P28069 291 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 GGT2P36268 569 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 AQP2P41181 271 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 SMSP52788 366 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 RPS3AP61247 264 aaKnown RBP12.76□□□□□ -0.37
SF3B1-204ENST00000414963 RPL18Q07020 188 aaKnown RBP12.76□□□□□ -0.37
SF3B1-204ENST00000414963 ST3GAL2Q16842 350 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 MS4A18Q3C1V0 323 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 ALG10Q5BKT4 473 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 C12orf73Q69YU5 71 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 NHLRC1Q6VVB1 395 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 PXKQ7Z7A4 578 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 CHERPQ8IWX8 916 aaKnown RBP12.76□□□□□ -0.37
SF3B1-204ENST00000414963 LNX2Q8N448 690 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 CISD2Q8N5K1 135 aaKnown RBP12.76□□□□□ -0.37
SF3B1-204ENST00000414963 TMEM99Q8N816 258 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 OR2T33Q8NG76 320 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 CPNE4Q96A23 557 aaPredicted RBP12.76□□□□□ -0.37
SF3B1-204ENST00000414963 SARAFQ96BY9 339 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 ZHX1-C8orf76Q96EF9 292 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 DNAJA3Q96EY1 480 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 ZNF570Q96NI8 536 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 TSSK6Q9BXA6 273 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 SRXN1Q9BYN0 137 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 ANKRD60Q9BZ19 345 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 TSPAN10Q9H1Z9 355 aaPredicted RBP12.76□□□□□ -0.37
SF3B1-204ENST00000414963 Q9H521 79 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 NRIP3Q9NQ35 241 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 TBC1D23Q9NUY8 699 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 LUZP4Q9P127 313 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 SEC14L4Q9UDX3 406 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 RASD1Q9Y272 281 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 HSPE1-MOB4S4R3N1 261 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 IMPA2O14732 288 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 BCKDKO14874 412 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 CXCL13O43927 109 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 OR6A2O95222 327 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 TXNDC12O95881 172 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 HMGN1P05114 100 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 CD14P08571 375 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 FREM3P0C091 2139 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 ADORA3P0DMS8 318 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 ENPP1P22413 925 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 GRK5P34947 590 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 EIF1AXP47813 144 aaKnown RBP12.75□□□□□ -0.37
SF3B1-204ENST00000414963 TDGF1P3P51864 188 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 EFNB1P98172 346 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 PUDPQ08623 228 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 POU4F3Q15319 338 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 GXYLT1Q4G148 440 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 ZNF691Q5VV52 312 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 TMEM236Q5W0B7 351 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 ACSM5Q6NUN0 579 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 Q6ZPB1 254 aaPredicted RBP12.75□□□□□ -0.37
SF3B1-204ENST00000414963 PM20D2Q8IYS1 436 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 UBQLNLQ8IYU4 475 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 GHDCQ8N2G8 530 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 OR4Q3Q8NH05 313 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 ZPLD1Q8TCW7 415 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 RELTQ969Z4 430 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 SNRNP40Q96DI7 357 aaKnown RBP12.75□□□□□ -0.37
SF3B1-204ENST00000414963 SLX1AQ9BQ83 275 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 TEX12Q9BXU0 123 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 B3GAT1Q9P2W7 334 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 GMPPBQ9Y5P6 360 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 NOX1Q9Y5S8 564 aa12.75□□□□□ -0.37
SF3B1-204ENST00000414963 MED12Q93074 2177 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 A0A1B0GTH9 108 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 ZNF814B7Z6K7 855 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 MCIDASD6RGH6 385 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 SMAD9O15198 467 aaKnown RBP12.74□□□□□ -0.37
SF3B1-204ENST00000414963 IGHMP01871 453 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 GNAO1P09471 354 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 ACADSP16219 412 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 MYF6P23409 242 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 RPL4P36578 427 aaKnown RBP12.74□□□□□ -0.37
SF3B1-204ENST00000414963 SRYQ05066 204 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 PGGHGQ32M88 737 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 EMC4Q5J8M3 183 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 CLEC12AQ5QGZ9 265 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 GPR139Q6DWJ6 353 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 FAM122BQ7Z309 247 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 FGD2Q7Z6J4 655 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 ADGRE4PQ86SQ3 457 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 CCDC71Q8IV32 467 aaPredicted RBP12.74□□□□□ -0.37
SF3B1-204ENST00000414963 ANKK1Q8NFD2 765 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 TRUB1Q8WWH5 349 aaKnown RBP12.74□□□□□ -0.37
SF3B1-204ENST00000414963 MUS81Q96NY9 551 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 OXGR1Q96P68 337 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 UCN2Q96RP3 112 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 APOL4Q9BPW4 351 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 IFT27Q9BW83 186 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 SF3B5Q9BWJ5 86 aaKnown RBP12.74□□□□□ -0.37
SF3B1-204ENST00000414963 INIPQ9NRY2 104 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 IL20RAQ9UHF4 553 aa12.74□□□□□ -0.37
SF3B1-204ENST00000414963 MPDZO75970 2070 aa12.73□□□□□ -0.37
SF3B1-204ENST00000414963 AHRRA9YTQ3 701 aa12.73□□□□□ -0.37
SF3B1-204ENST00000414963 RNF13O43567 381 aa12.73□□□□□ -0.37
SF3B1-204ENST00000414963 PPP1R3DO95685 299 aa12.73□□□□□ -0.37
SF3B1-204ENST00000414963 SLC16A1P53985 500 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms