RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 NR4A1P22736 598 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 MDH1P40925 334 aaKnown RBP13.43□□□□□ -0.26
CPNE1-208ENST00000414711 RAD52P43351 418 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 MTNR1AP48039 350 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 HTR6P50406 440 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 ATP12AP54707 1039 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 PKNOX1P55347 436 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 ABCE1P61221 599 aaKnown RBP13.43□□□□□ -0.26
CPNE1-208ENST00000414711 SKP2Q13309 424 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 HLXQ14774 488 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-208ENST00000414711 ZNF771Q7L3S4 317 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-208ENST00000414711 HOMEZQ8IX15 550 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 ZFP28Q8NHY6 868 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 CIDECQ96AQ7 238 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-208ENST00000414711 ZNF385AQ96PM9 386 aaKnown RBP13.43□□□□□ -0.26
CPNE1-208ENST00000414711 STACQ99469 402 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 CCDC106Q9BWC9 280 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 KRTAP17-1Q9BYP8 105 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 MS4A7Q9GZW8 240 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-208ENST00000414711 CRLF2Q9HC73 371 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 DUSP22Q9NRW4 184 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 ACER3Q9NUN7 267 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 SIRT5Q9NXA8 310 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 MYEF2Q9P2K5 600 aaKnown RBP13.43□□□□□ -0.26
CPNE1-208ENST00000414711 NPIPB9F8W1W9 429 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 POLR3GO15318 223 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-208ENST00000414711 GPANK1O95872 356 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 CRYBA1P05813 215 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 APOBEC1P41238 236 aaKnown RBP13.42□□□□□ -0.26
CPNE1-208ENST00000414711 SLC1A6P48664 564 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 RELBQ01201 579 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 BST1Q10588 318 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 ATP6AP1LQ52LC2 224 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 SAMD5Q5TGI4 173 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 GPRIN3Q6ZVF9 776 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 KIRREL3Q8IZU9 778 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 ZNF382Q96SR6 550 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 CTPS2Q9NRF8 586 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 THAP1Q9NVV9 213 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 TMEM181Q9P2C4 612 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 WIPI2Q9Y4P8 454 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 AUP1Q9Y679 476 aa13.42□□□□□ -0.26
CPNE1-208ENST00000414711 PPIAL4EA0A075B759 164 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 PPIAL4CA0A0B4J2A2 164 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 PPIAL4DF5H284 164 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 EIF1BO60739 113 aaKnown RBP13.41□□□□□ -0.26
CPNE1-208ENST00000414711 NDUFA7O95182 113 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 PPIAL4FP0DN26 164 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 HMOX2P30519 316 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 ARR3P36575 388 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 MAGEB1P43366 347 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 SLC35A1P78382 337 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 GUCY1A3Q02108 690 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 C2orf68Q2NKX9 166 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 SPDYAQ5MJ70 313 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 DCST2Q5T1A1 773 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 LRP11Q86VZ4 500 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 ZIC4Q8N9L1 334 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 IL17RDQ8NFM7 739 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 OR9K2Q8NGE7 335 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 GAL3ST1Q99999 423 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 NAA11Q9BSU3 229 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-208ENST00000414711 LAT2Q9GZY6 243 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 PIGUQ9H490 435 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 CCDC134Q9H6E4 229 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 MID1IP1Q9NPA3 183 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 C1RLQ9NZP8 487 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 PURGQ9UJV8 347 aaKnown RBP13.41□□□□□ -0.26
CPNE1-208ENST00000414711 TRAPPC4Q9Y296 219 aa13.41□□□□□ -0.26
CPNE1-208ENST00000414711 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-208ENST00000414711 POLR3HQ9Y535 204 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-208ENST00000414711 A0A1W2PPW3 197 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 ZNF503-AS2A6NEH8 195 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 CLDN25C9JDP6 229 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 ANKRD28O15084 1053 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 CRCPO75575 148 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 ENO1P06733 434 aaKnown RBP13.4□□□□□ -0.26
CPNE1-208ENST00000414711 BCKDHAP12694 445 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 HOXB1P14653 301 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-208ENST00000414711 CLK1P49759 484 aaKnown RBP13.4□□□□□ -0.26
CPNE1-208ENST00000414711 SH3BGRP55822 239 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-208ENST00000414711 LASP1Q14847 261 aaKnown RBP13.4□□□□□ -0.26
CPNE1-208ENST00000414711 MMEL1Q495T6 779 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 PDZK1Q5T2W1 519 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 ANKRD26P1Q6NSI1 321 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 C11orf87Q6NUJ2 197 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 LINGO2Q7L985 606 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 GLB1L3Q8NCI6 653 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-208ENST00000414711 TIMD4Q96H15 378 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 TCF7L1Q9HCS4 588 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 ZNF346Q9UL40 294 aaKnown RBP13.4□□□□□ -0.26
CPNE1-208ENST00000414711 RAP2CQ9Y3L5 183 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 NOX1Q9Y5S8 564 aa13.4□□□□□ -0.26
CPNE1-208ENST00000414711 EPPK1P58107 5090 aaKnown RBP13.4□□□□□ -0.27
CPNE1-208ENST00000414711 MDFIC2A0A1B0GVS7 189 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 HOXA3O43365 443 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-208ENST00000414711 ITM2AO43736 263 aa13.39□□□□□ -0.27
CPNE1-208ENST00000414711 SNNO75324 88 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-208ENST00000414711 HMGN2P05204 90 aaKnown RBP13.39□□□□□ -0.27
CPNE1-208ENST00000414711 CHRNGP07510 517 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms