RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SHBQ15464 509 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 GPR157Q5UAW9 335 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 NKAIN2Q5VXU1 208 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 MEDAGQ5VYS4 303 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 ABLIM2Q6H8Q1 611 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 ZNF551Q7Z340 670 aaPredicted RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 C16orf62Q7Z3J2 963 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 TECPR1Q7Z6L1 1165 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 GPAT4Q86UL3 456 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 COMMD7Q86VX2 200 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 RBM45Q8IUH3 476 aaKnown RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 OR10H4Q8NGA5 316 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 LINGO1Q96FE5 620 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 MAPKAP1Q9BPZ7 522 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 TMEM168Q9H0V1 697 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 ZNF160Q9HCG1 818 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 HHATLQ9HCP6 504 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 SLC2A4RGQ9NR83 387 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 YAE1D1Q9NRH1 226 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 MCUBQ9NWR8 336 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 FKBP7Q9Y680 259 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 PIKFYVEQ9Y2I7 2098 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 A0A1W2PRG6 482 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 FOXE1O00358 373 aaPredicted RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 NDUFA2O43678 99 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 GLCEO94923 617 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 PAK4O96013 591 aaPredicted RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 CTSBP07858 339 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 SLC2A2P11168 524 aaPredicted RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 SDC2P34741 201 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 FEN1P39748 380 aaKnown RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 CRYBB2P43320 205 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 TTPAP49638 278 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 CNN1P51911 297 aaKnown RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 RAB4BP61018 213 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 PPP2CBP62714 309 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 PPP3R1P63098 170 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 PPP2CAP67775 309 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 HOXC5Q00444 222 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 AMZ1Q400G9 498 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 GPRC6AQ5T6X5 926 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 HENMT1Q5T8I9 393 aaKnown RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 ZNF776Q68DI1 518 aaPredicted RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 CFAP77Q6ZQR2 320 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 WFDC3Q8IUB2 231 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 KRTCAP2Q8N6L1 136 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 LRRC17Q8N6Y2 441 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 SLC37A3Q8NCC5 494 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 NUDT10Q8NFP7 164 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 OR10G2Q8NGC3 310 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 OR5M1Q8NGP8 315 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 SLC2A12Q8TD20 617 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 CREB3L1Q96BA8 519 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 TESCQ96BS2 214 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 LRR1Q96L50 414 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 FEVQ99581 238 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 NUDT22Q9BRQ3 303 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 MED18Q9BUE0 208 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 NRSN2Q9GZP1 204 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 CTDSP1Q9GZU7 261 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 PPIL3Q9H2H8 161 aaKnown RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 MIXL1Q9H2W2 232 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 LMAN1LQ9HAT1 526 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 APMAPQ9HDC9 416 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 SLC6A13Q9NSD5 602 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 PISDQ9UG56 409 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 GLS2Q9UI32 602 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 ZFR2Q9UPR6 939 aaKnown RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 CA5BQ9Y2D0 317 aa8.61□□□□□ -1.03
SNHG3-201ENST00000413987 PCYT1BQ9Y5K3 369 aaPredicted RBP8.61□□□□□ -1.03
SNHG3-201ENST00000413987 KNL1Q8NG31 2342 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 PLXNA2O75051 1894 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 ANKRD12Q6UB98 2062 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 A0A1W2PRB8 838 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 TMEM202A6NGA9 273 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 LYRM1O43325 122 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 SUV39H1O43463 412 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 STX11O75558 287 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 GPX2P18283 190 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 GABRG2P18507 467 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 TIA1P31483 386 aaKnown RBP eCLIP8.6□□□□□ -1.032e-22■■■■■ 27.6
SNHG3-201ENST00000413987 INPP1P49441 399 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 EMP2P54851 167 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 FZD5Q13467 585 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 C1DQ13901 141 aaKnown RBP8.6□□□□□ -1.03
SNHG3-201ENST00000413987 FAM189A2Q15884 450 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 MRPL14Q6P1L8 145 aaKnown RBP8.6□□□□□ -1.03
SNHG3-201ENST00000413987 TMEM71Q6P5X7 295 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 TMEM81Q6P7N7 255 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 Q6ZPB1 254 aaPredicted RBP8.6□□□□□ -1.03
SNHG3-201ENST00000413987 LRRC75A-AS1Q8N1F1 130 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 C10orf111Q8N326 155 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 CXorf40AQ8TE69 158 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 GRHL3Q8TE85 626 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 NUS1Q96E22 293 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 HBEGFQ99075 208 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 TMEM43Q9BTV4 400 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 ABHD6Q9BV23 337 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 MND1Q9BWT6 205 aa8.6□□□□□ -1.03
SNHG3-201ENST00000413987 HDAC8Q9BY41 377 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms