RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 SMPD1P17405 629 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 GABRR1P24046 479 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 ZNF85Q03923 595 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 BTN1A1Q13410 526 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 PRAMEF9Q5VWM5 478 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 NXNL2Q5VZ03 156 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 KRTCAP2Q8N6L1 136 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 OR10Q1Q8NGQ4 319 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 CREB3L4Q8TEY5 395 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 TIMM29Q9BSF4 260 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 OBP2BQ9NPH6 170 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 KCNK6Q9Y257 313 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 ZNF732B4DXR9 585 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 PRAMEF26H0Y7S4 382 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 TPOP07202 933 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 DEFA4P12838 97 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 AGTR2P50052 363 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 KCNQ1P51787 676 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 TCTAP57738 103 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 DHODHQ02127 395 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 ADIRFQ15847 76 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 ZNF239Q16600 458 aaKnown RBP6.89□□□□□ -1.31
PTPN3-203ENST00000412145 ZNF628Q5EBL2 1059 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 EMC4Q5J8M3 183 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 DPY19L2P2Q6ZN68 376 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 APOBEC3GQ9HC16 384 aaKnown RBP6.89□□□□□ -1.31
PTPN3-203ENST00000412145 RHBDD3Q9Y3P4 386 aa6.89□□□□□ -1.31
PTPN3-203ENST00000412145 SOWAHBA6NEL2 793 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 AGPAT2O15120 278 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 LEFTY1O75610 366 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 VAMP5O95183 116 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 IL1R2P27930 398 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 HOXA11P31270 313 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 ZNF280AP59817 542 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 PPP1CAP62136 330 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 ECM1Q16610 540 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 CDH26Q8IXH8 852 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 BOLLQ8N9W6 283 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 CMTM3Q96MX0 182 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 POLDIP2Q9Y2S7 368 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 SH2D7A6NKC9 451 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 RNGTTO60942 597 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 F2RP25116 425 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 LMO2P25791 158 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 SEC61A1P61619 476 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 ANKRD16Q6P6B7 361 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 ELF4Q99607 663 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 ATP5SQ99766 215 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 SPHK2Q9NRA0 654 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 PURGQ9UJV8 347 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 TCRBV3S1A0A5B6 114 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 OR2M5A3KFT3 312 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 FAM155AB1AL88 458 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 CBX7O95931 251 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 PDGFBP01127 241 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 PIPP12273 146 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 VIPR2P41587 438 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 LGALS4P56470 323 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 KIAA0141Q14154 515 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 ZNF765Q7L2R6 523 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 PINX1Q96BK5 328 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 SMOQ99835 787 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 CBLCQ9ULV8 474 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 COX5AP20674 150 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 DRD1P21728 446 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 MRPL19P49406 292 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 CDC20BQ86Y33 519 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 DVL3Q92997 716 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 EMID1Q96A84 441 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 PLK3Q9H4B4 646 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 TAF9BQ9HBM6 251 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 KIAA1456Q9P272 454 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 TRAPPC2LQ9UL33 140 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 ACTL7AQ9Y615 435 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 FZD9O00144 591 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 ABCD4O14678 606 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 CYTIPO60759 359 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 CLEC3BP05452 202 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 ITGB7P26010 798 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 HNRNPA3P51991 378 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 TMEM183BQ1AE95 376 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 DCAF12L1Q5VU92 463 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 EIF4E3Q8N5X7 224 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 VN1R3Q9BXE9 311 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 CPEB1Q9BZB8 566 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 METTL17Q9H7H0 456 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 ZMAT5Q9UDW3 170 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 NFS1Q9Y697 457 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 DCDC2BA2VCK2 349 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 F5H5K5 113 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 CD79AP11912 226 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 SPINT3P49223 89 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 SLC11A1P49279 550 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 UBE2MP61081 183 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 SNRPGP62308 76 aaKnown RBP6.88□□□□□ -1.31
PTPN3-203ENST00000412145 VAMP3Q15836 100 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 CDONQ4KMG0 1287 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 SYPL2Q5VXT5 272 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 FIGLAQ6QHK4 219 aa6.88□□□□□ -1.31
PTPN3-203ENST00000412145 IL20RBQ6UXL0 311 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms