RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 PRDM4Q9UKN5 801 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 IGHV2OR16-5A0A0B4J2B6 119 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 TMEM229AB2RXF0 380 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ADRA2AP08913 450 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 PRG2P13727 222 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 NPRL3Q12980 569 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 RIN1Q13671 783 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CCNIQ14094 377 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 MAPK11Q15759 364 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 LIN52Q52LA3 116 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 UGT2A3Q6UWM9 527 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 RINLQ6ZS11 566 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CKAP2Q8WWK9 683 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 OR52E6Q96RD3 313 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 PLA2G12AQ9BZM1 189 aa12.32□□□□□ -0.44
HLA-DQB2-229ENST00000411527 DYSFO75923 2080 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 A0A096LPI6 279 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 RPL36A-HNRNPH2H7BZ11 118 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 NPIPB7O75200 414 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 AHSA1O95433 338 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 IGFBP1P08833 259 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 PNMTP11086 282 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ZNF43P17038 809 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 PCMT1P22061 227 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CFPP27918 469 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 IL12AP29459 219 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ARR3P36575 388 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CAPZA2P47755 286 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SLC1A6P48664 564 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 DVL1P1P54792 670 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SNTB2Q13425 540 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 DAG1Q14118 895 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ATG16L1Q676U5 607 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 LRRC34Q8IZ02 419 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CDK20Q8IZL9 346 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CLIP4Q8N3C7 705 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 GPR137CQ8N3F9 429 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ANKK1Q8NFD2 765 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 MFSD8Q8NHS3 518 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 STK35Q8TDR2 534 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SORT1Q99523 831 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 TPK1Q9H3S4 243 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CRLF2Q9HC73 371 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 GPR35Q9HC97 309 aa12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ZNF443Q9Y2A4 671 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ZNF503-AS2A6NEH8 195 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 FTCDNL1E5RQL4 147 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 BIRC5O15392 142 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SLC43A1O75387 559 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ZNF432O94892 652 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 VENTXO95231 258 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 KRT75O95678 551 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ALDOCP09972 364 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 RPS5P46782 204 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 IL1RL1Q01638 556 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 LRRC74AQ0VAA2 488 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 LARS2Q15031 903 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CEACAM16Q2WEN9 425 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 KRT80Q6KB66 452 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 MDP1Q86V88 176 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 IL17RDQ8NFM7 739 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ZNF837Q96EG3 531 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 OXGR1Q96P68 337 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 METTL17Q9H7H0 456 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 MEAF6Q9HAF1 191 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CALML5Q9NZT1 146 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 P2RX2Q9UBL9 471 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SEC14L4Q9UDX3 406 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ZNF232Q9UNY5 417 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 RCE1Q9Y256 329 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CMAHPQ9Y471 501 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 DSPPQ9NZW4 1301 aa12.3□□□□□ -0.44
HLA-DQB2-229ENST00000411527 B4DSR2 109 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 RFXANKO14593 260 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SEC14L2O76054 403 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 BCHEP06276 602 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ETFAP13804 333 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 GTF2E2P29084 291 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CRATP43155 626 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 MVDP53602 400 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CRISP3P54108 245 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 EGR4Q05215 589 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 C1DQ13901 141 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 RPS26P11Q5JNZ5 115 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 RNF220Q5VTB9 566 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 OGFOD2Q6N063 350 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SERPINA11Q86U17 422 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 GLCCI1Q86VQ1 547 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CCDC36Q8IYA8 594 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SLC38A5Q8WUX1 472 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 PTDSS2Q9BVG9 487 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SPATA9Q9BWV2 254 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ARMC7Q9H6L4 198 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 NOX3Q9HBY0 568 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SLC6A13Q9NSD5 602 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 PNPOQ9NVS9 261 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 AIG1Q9NVV5 245 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 REV1Q9UBZ9 1251 aa12.29□□□□□ -0.44
HLA-DQB2-229ENST00000411527 USP22Q9UPT9 525 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms