RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 WBP1Q96G27 269 aa13.08□□□□□ -0.32
MINDY4-202ENST00000409881 ZNF578Q96N58 590 aaPredicted RBP13.08□□□□□ -0.32
MINDY4-202ENST00000409881 DGAT2Q96PD7 388 aa13.08□□□□□ -0.32
MINDY4-202ENST00000409881 OR2M2Q96R28 347 aa13.08□□□□□ -0.32
MINDY4-202ENST00000409881 CXorf36Q9H7Y0 433 aa13.08□□□□□ -0.32
MINDY4-202ENST00000409881 WDR54Q9H977 334 aa13.08□□□□□ -0.32
MINDY4-202ENST00000409881 PTTG3PQ9NZH4 202 aa13.08□□□□□ -0.32
MINDY4-202ENST00000409881 NXT1Q9UKK6 140 aaKnown RBP13.08□□□□□ -0.32
MINDY4-202ENST00000409881 EXOSC1Q9Y3B2 195 aaKnown RBP13.08□□□□□ -0.32
MINDY4-202ENST00000409881 KCNMB2Q9Y691 235 aa13.08□□□□□ -0.32
MINDY4-202ENST00000409881 NUP210LQ5VU65 1888 aa13.08□□□□□ -0.32
MINDY4-202ENST00000409881 WDFY3Q8IZQ1 3526 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 hCG_1807616A0A1W2PRN6 198 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 M0R233 179 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 SLC35E2P0CK97 266 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 CCR6P51684 374 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 EMP2P54851 167 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 IGLV3-21P80748 117 aaPredicted RBP13.07□□□□□ -0.32
MINDY4-202ENST00000409881 EFNB1P98172 346 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 BAMBIQ13145 260 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 SERTAD2Q14140 314 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 SLC25A30Q5SVS4 291 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 SZRD1Q7Z422 152 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 HMGN2P46Q86SG4 172 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 SAMD12Q8N8I0 201 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 OR6M1Q8NGM8 313 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 OR5M3Q8NGP4 307 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 KAT2AQ92830 837 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 HGDQ93099 445 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 RBM18Q96H35 190 aaKnown RBP13.07□□□□□ -0.32
MINDY4-202ENST00000409881 NEUROD4Q9HD90 331 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 CYSLTR2Q9NS75 346 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 SLC9A8Q9Y2E8 581 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 AHCTF1Q8WYP5 2266 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 MEIKINA0A087WXM9 373 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 IGKV3D-11A0A0A0MRZ8 115 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 TRABD2BA6NFA1 517 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 M0R3H8 397 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 SSNA1O43805 119 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 ZP3P21754 424 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 CD82P27701 267 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 CDK5Q00535 292 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 ZNF155Q12901 538 aaPredicted RBP13.07□□□□□ -0.32
MINDY4-202ENST00000409881 LANCL3Q6ZV70 420 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 FTMTQ8N4E7 242 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 OR4K5Q8NGD3 323 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 OR52H1Q8NGJ2 320 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 OR8D4Q8NGM9 314 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 ABHD1Q96SE0 405 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 SECISBP2Q96T21 854 aaKnown RBP13.07□□□□□ -0.32
MINDY4-202ENST00000409881 PNO1Q9NRX1 252 aaKnown RBP13.07□□□□□ -0.32
MINDY4-202ENST00000409881 SDHAF2Q9NX18 166 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 NUBP2Q9Y5Y2 271 aa13.07□□□□□ -0.32
MINDY4-202ENST00000409881 ATP1B1P05026 303 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 FCER2P06734 321 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 CFL1P23528 166 aaKnown RBP13.06□□□□□ -0.32
MINDY4-202ENST00000409881 MC3RP41968 323 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 PITPNBP48739 271 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 MAP4K2Q12851 820 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 RTP5Q14D33 572 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 MLC1Q15049 377 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 VASNQ6EMK4 673 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 IGF2-ASQ6U949 168 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 DGAT2L6Q6ZPD8 337 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 COMTD1Q86VU5 262 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 OR2T35Q8NGX2 323 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 SPRYD4Q8WW59 207 aaPredicted RBP13.06□□□□□ -0.32
MINDY4-202ENST00000409881 GIMAP1Q8WWP7 306 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 METTL21AQ8WXB1 218 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 FUZQ9BT04 418 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 SCNM1Q9BWG6 230 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 MRPS18AQ9NVS2 196 aaKnown RBP13.06□□□□□ -0.32
MINDY4-202ENST00000409881 TNFRSF10DQ9UBN6 386 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 A4GNTQ9UNA3 340 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 ALOX12BO75342 701 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 CD3GP09693 182 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 DLSTP36957 453 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 NUP62P37198 522 aaPredicted RBP13.06□□□□□ -0.32
MINDY4-202ENST00000409881 FOLR3P41439 243 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 STAT5AP42229 794 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 ID4P47928 161 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 RPS18P62269 152 aaKnown RBP13.06□□□□□ -0.32
MINDY4-202ENST00000409881 ZSWIM7Q19AV6 140 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 SLC36A2Q495M3 483 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 CLEC12AQ5QGZ9 265 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 OLIG3Q7RTU3 272 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
MINDY4-202ENST00000409881 KLBQ86Z14 1044 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 PLPP5Q8NEB5 264 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 OR2T4Q8NH00 348 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 UBL7Q96S82 380 aaPredicted RBP13.06□□□□□ -0.32
MINDY4-202ENST00000409881 MESP1Q9BRJ9 268 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 REG4Q9BYZ8 158 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 MCCC2Q9HCC0 563 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 SIRT3Q9NTG7 399 aaPredicted RBP13.06□□□□□ -0.32
MINDY4-202ENST00000409881 CLEC4AQ9UMR7 237 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 SPTBN4Q9H254 2564 aa13.06□□□□□ -0.32
MINDY4-202ENST00000409881 TCRBV16S1A1N1A0A5B0 115 aa13.05□□□□□ -0.32
MINDY4-202ENST00000409881 KLF7O75840 302 aaPredicted RBP13.05□□□□□ -0.32
MINDY4-202ENST00000409881 DXOO77932 396 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms