RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 GJE1A6NN92 205 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 SELENOFO60613 162 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 APEHP13798 732 aaKnown RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 HIST1H1CP16403 213 aaKnown RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 DYNC1I2Q13409 638 aaKnown RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 SYT14P1Q58G82 188 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 C19orf48Q6RUI8 117 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 LINGO2Q7L985 606 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 SERPINA12Q8IW75 414 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 C9orf40Q8IXQ3 194 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 OR5D18Q8NGL1 313 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 ZNF566Q969W8 418 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 FAM46BQ96A09 425 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 INTS12Q96CB8 462 aaKnown RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 TMEM41AQ96HV5 264 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 ARL5BQ96KC2 179 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 NKX3-1Q99801 234 aaPredicted RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 AICDAQ9GZX7 198 aa10.39□□□□□ -0.75
SNX13-202ENST00000409604 CHMP1AQ9HD42 196 aaPredicted RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 COA3Q9Y2R0 106 aaPredicted RBP10.39□□□□□ -0.75
SNX13-202ENST00000409604 ZNF593O00488 134 aaPredicted RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 PRICKLE3O43900 615 aaPredicted RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 FAPQ12884 760 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 ACKR1Q16570 336 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 SOWAHCQ53LP3 525 aaPredicted RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 NKAPLQ5M9Q1 402 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 MEDAGQ5VYS4 303 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 MZT2AQ6P582 158 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 ZNF322Q6U7Q0 402 aaPredicted RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 NR4A3Q92570 626 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 PIGQQ9BRB3 760 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 ALG12Q9BV10 488 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 DUSP13Q9UII6 198 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 AK6Q9Y3D8 172 aaKnown RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 TCRBV5S2A0A599 114 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 TSC22D2O75157 780 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 NKX2-2O95096 273 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 HPRP00739 348 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 RIDAP52758 137 aaKnown RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 RPL18Q07020 188 aaKnown RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 PUDPQ08623 228 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 EIF3IQ13347 325 aaKnown RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 LYPD4Q6UWN0 246 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 NPSR1Q6W5P4 371 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 MARVELD2Q8N4S9 558 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 RNASE11Q8TAA1 199 aaKnown RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 ITFG2Q969R8 447 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 FUNDC2Q9BWH2 189 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 COL25A1Q9BXS0 654 aaPredicted RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 TICRRQ7Z2Z1 1910 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 NLRC5Q86WI3 1866 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 TRAV36DV7A0A075B6V5 113 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 CT45A8P0DMV1 189 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 CT45A9P0DMV2 189 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 ENPP1P22413 925 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 SLC37A1P57057 533 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 RASGEF1BQ0VAM2 473 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 CT45A2Q5DJT8 189 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 ABHD12BQ7Z5M8 362 aaPredicted RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 GOLM1Q8NBJ4 401 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 GGHQ92820 318 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 INTS14Q96SY0 518 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 CCDC86Q9H6F5 360 aaKnown RBP10.38□□□□□ -0.75
SNX13-202ENST00000409604 TMEM138Q9NPI0 162 aa10.38□□□□□ -0.75
SNX13-202ENST00000409604 PTPRDP23468 1912 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 CCRL2O00421 344 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 CSTBP04080 98 aaKnown RBP10.37□□□□□ -0.75
SNX13-202ENST00000409604 HLA-DPB1P04440 258 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 MYF6P23409 242 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 CDAP32320 146 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 PNLIPRP2P54317 469 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 CBX3Q13185 183 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 SLC16A14Q7RTX9 510 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 MRGPREQ86SM8 312 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 SLC35F2Q8IXU6 374 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 ENTHD1Q8IYW4 607 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 SCARF2Q96GP6 870 aaPredicted RBP10.37□□□□□ -0.75
SNX13-202ENST00000409604 OR5M11Q96RB7 305 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 ANKRD60Q9BZ19 345 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 ELOVL3Q9HB03 270 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 MRPL15Q9P015 296 aaKnown RBP10.37□□□□□ -0.75
SNX13-202ENST00000409604 CRNNQ9UBG3 495 aaPredicted RBP10.37□□□□□ -0.75
SNX13-202ENST00000409604 FBXL2Q9UKC9 423 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 FRG2CA6NGY1 282 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 ACOD1A6NK06 481 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 H0YC42 278 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 SYT5O00445 386 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 PRODHO43272 600 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 BCAS1O75363 584 aaPredicted RBP10.37□□□□□ -0.75
SNX13-202ENST00000409604 IGHG1P01857 330 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 PATE4P0C8F1 98 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 SOX8P57073 446 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 FOXK1P85037 733 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 SSPNQ14714 243 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 HES5Q5TA89 166 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 ZNF813Q6ZN06 617 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 RDH10Q8IZV5 341 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 CISD2Q8N5K1 135 aaKnown RBP10.37□□□□□ -0.75
SNX13-202ENST00000409604 RFT1Q96AA3 541 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 ORAI1Q96D31 301 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms