RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 SYS1Q8N2H4 156 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 OR2AK2Q8NG84 335 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 SNX33Q8WV41 574 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 TNFAIP8L1Q8WVP5 186 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 PHYHIPQ92561 330 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 PDCD1LG2Q9BQ51 273 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 SLC25A18Q9H1K4 315 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 ATG4BQ9Y4P1 393 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 PCYT1BQ9Y5K3 369 aaPredicted RBP14.18□□□□□ -0.14
LIMS2-205ENST00000409455 TRPM6Q9BX84 2022 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 A0A1W2PQF6 199 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 A0A1W2PR48 441 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 DUXAA6NLW8 204 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 OR5K4A6NMS3 321 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 MAGEB4O15481 346 aaPredicted RBP14.18□□□□□ -0.14
LIMS2-205ENST00000409455 RLN1P04808 185 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 UBBP0CG47 229 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 UBCP0CG48 685 aaKnown RBP14.18□□□□□ -0.14
LIMS2-205ENST00000409455 VSIG10L2P0DP72 767 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 PPP2CBP62714 309 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 RPS27AP62979 156 aaKnown RBP14.18□□□□□ -0.14
LIMS2-205ENST00000409455 UBA52P62987 128 aaKnown RBP14.18□□□□□ -0.14
LIMS2-205ENST00000409455 ERVK-25P63136 954 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 PPP2CAP67775 309 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 CBFBQ13951 182 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 TMEM35AQ53FP2 167 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 OR7E24Q6IFN5 339 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 TSSK4Q6SA08 328 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 CAMKVQ8NCB2 501 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 MTHFD2LQ9H903 347 aaPredicted RBP14.18□□□□□ -0.14
LIMS2-205ENST00000409455 TMEM138Q9NPI0 162 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 MBNL1Q9NR56 388 aaKnown RBP14.18□□□□□ -0.14
LIMS2-205ENST00000409455 POT1Q9NUX5 634 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 GNG8Q9UK08 70 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 KCNK7Q9Y2U2 307 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 WDR45Q9Y484 360 aa14.18□□□□□ -0.14
LIMS2-205ENST00000409455 A0A1W2PS29 197 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 TMEM127O75204 238 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 KLF8O95600 359 aaPredicted RBP14.17□□□□□ -0.14
LIMS2-205ENST00000409455 AIFM1O95831 613 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 NAT2P11245 290 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 PTHLHP12272 177 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 HOXB2P14652 356 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 COL9A1P20849 921 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 HCCSP53701 268 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 CLDN12P56749 244 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 ILF3Q12906 894 aaKnown RBP eCLIP14.17□□□□□ -0.14
LIMS2-205ENST00000409455 WDR88Q6ZMY6 472 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 OR5K2Q8NHB8 316 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 BPIFA2Q96DR5 249 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 MRI1Q9BV20 369 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 GPR34Q9UPC5 381 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 TRAV27A0A087WT01 109 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 ERI3O43414 337 aaKnown RBP14.17□□□□□ -0.14
LIMS2-205ENST00000409455 STATHP02808 62 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 HIST1H1TP22492 207 aaPredicted RBP14.17□□□□□ -0.14
LIMS2-205ENST00000409455 CDK2P24941 298 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 ARHGDIBP52566 201 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 ZNF136P52737 540 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 CLDN2P57739 230 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 FGL2Q14314 439 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 C2orf68Q2NKX9 166 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 ELP2Q6IA86 826 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 BPIFCQ8NFQ6 507 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 OR14C36Q8NHC7 312 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 NSMAFQ92636 917 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 HAVCR1Q96D42 359 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 SLC35A4Q96G79 324 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 COX14Q96I36 57 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 KLHL31Q9H511 634 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 SIGLEC7Q9Y286 467 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 V9GY05 133 aa14.17□□□□□ -0.14
LIMS2-205ENST00000409455 SYNDIG1LA6NDD5 238 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 VEGFDO43915 354 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 PPP1R3DO95685 299 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 IFNGP01579 166 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 OR2T7P0C7T2 308 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 MGMTP16455 207 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 CD96P40200 585 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 STARP49675 285 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 CSNK1G2P78368 415 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 CDK3Q00526 305 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 SORDQ00796 357 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 MPPED2Q15777 294 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 CCDC157Q569K6 752 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 DCAF12L2Q5VW00 463 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 PWWP2BQ6NUJ5 590 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 SLC48A1Q6P1K1 146 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 ADAMTSL4Q6UY14 1074 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 SLC36A1Q7Z2H8 476 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 OR2T27Q8NH04 317 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 ASB13Q8WXK3 278 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 CNN2Q99439 309 aaKnown RBP14.16□□□□□ -0.14
LIMS2-205ENST00000409455 GFI1Q99684 422 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 ANKRD10Q9NXR5 420 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 SLC39A1Q9NY26 324 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 NUMA1Q14980 2115 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 ACOD1A6NK06 481 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 GPRIN2O60269 458 aa14.16□□□□□ -0.14
LIMS2-205ENST00000409455 RASGRP1O95267 797 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms