RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CLEC1BQ9P126 229 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 FLVCR2Q9UPI3 526 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 FLRT2O43155 660 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 IGHA1P01876 353 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 UCHL1P09936 223 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 SBK2P0C263 348 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 HK1P19367 917 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 OR3A3P47888 321 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 GDI2P50395 445 aaKnown RBP12.27□□□□□ -0.44
COL6A2-204ENST00000409416 SNTB2Q13425 540 aaKnown RBP12.27□□□□□ -0.44
COL6A2-204ENST00000409416 DPY19L4Q7Z388 723 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 CDRT4Q8N9R6 151 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF485Q8NCK3 441 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 DUSP18Q8NEJ0 188 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 C16orf52Q8NHV5 167 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 CREB3L1Q96BA8 519 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 MRPL38Q96DV4 380 aaKnown RBP12.27□□□□□ -0.44
COL6A2-204ENST00000409416 OR10A4Q9H209 315 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF224Q9NZL3 707 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 KCNN3Q9UGI6 736 aa12.27□□□□□ -0.44
COL6A2-204ENST00000409416 EXOGQ9Y2C4 368 aaKnown RBP12.27□□□□□ -0.44
COL6A2-204ENST00000409416 IGHV5-51A0A0C4DH38 117 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 A0A0J9YY10 115 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 SCDO00767 359 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 FMO6PO60774 539 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 ALOX12BO75342 701 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 TCRBP04435 133 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 DBIP07108 87 aaKnown RBP12.27□□□□□ -0.45
COL6A2-204ENST00000409416 FXYD6P3P58550 94 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 PHF19Q5T6S3 580 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 TMPRSS12Q86WS5 348 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 MSANTD3Q96H12 275 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 HYLS1Q96M11 299 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 GTPBP2Q9BX10 602 aaKnown RBP12.27□□□□□ -0.45
COL6A2-204ENST00000409416 NARFLQ9H6Q4 476 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 CYSLTR2Q9NS75 346 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 MED17Q9NVC6 651 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 IGSF11Q5DX21 431 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 GIMAP1Q8WWP7 306 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 PRSS27Q9BQR3 290 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 SYT4Q9H2B2 425 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 FOLH1BQ9HBA9 442 aa12.27□□□□□ -0.45
COL6A2-204ENST00000409416 OIP5O43482 229 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 GDF9O60383 454 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 ANXA3P12429 323 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 ATF1P18846 271 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 CXCR1P25024 350 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 GNALP38405 381 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 GBX2P52951 348 aaPredicted RBP12.26□□□□□ -0.45
COL6A2-204ENST00000409416 KIR2DS3Q14952 304 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 ATXN7L3Q14CW9 347 aaPredicted RBP12.26□□□□□ -0.45
COL6A2-204ENST00000409416 LRFN4Q6PJG9 635 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 POMGNT2Q8NAT1 580 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 LGALS14Q8TCE9 139 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 NR4A3Q92570 626 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 FAM46BQ96A09 425 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 DHRS9Q9BPW9 319 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 EMC6Q9BV81 110 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 CLEC4MQ9H2X3 399 aaPredicted RBP12.26□□□□□ -0.45
COL6A2-204ENST00000409416 ELL3Q9HB65 397 aaPredicted RBP12.26□□□□□ -0.45
COL6A2-204ENST00000409416 ZMAT5Q9UDW3 170 aaKnown RBP12.26□□□□□ -0.45
COL6A2-204ENST00000409416 COL4A3Q01955 1670 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 CHP2O43745 196 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 AGR2O95994 175 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 HRGP04196 525 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 NID1P14543 1247 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 SPINK2P20155 84 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 ARHGAP11BQ3KRB8 267 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 SLC25A25Q6KCM7 469 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 LANCL3Q6ZV70 420 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 OR11H7Q8NGC8 314 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 NPRL2Q8WTW4 380 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 NXF5Q9H1B4 397 aaKnown RBP12.26□□□□□ -0.45
COL6A2-204ENST00000409416 NIPAL2Q9H841 368 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 MEPEQ9NQ76 525 aaPredicted RBP12.26□□□□□ -0.45
COL6A2-204ENST00000409416 SLC22A7Q9Y694 548 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 CACNA1DQ01668 2161 aa12.26□□□□□ -0.45
COL6A2-204ENST00000409416 DCDC2BA2VCK2 349 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 FAM25EA8MYX2 175 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 H2AFB2P0C5Z0 115 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 CFL1P23528 166 aaKnown RBP12.25□□□□□ -0.45
COL6A2-204ENST00000409416 SFTPDP35247 375 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 CAPZA2P47755 286 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 LRRC37A5PQ49AS3 106 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 C1orf53Q5VUE5 145 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 PYHIN1Q6K0P9 492 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 ALKBH2Q6NS38 261 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 NDUFAF7Q7L592 441 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 LINC00346Q8IVM7 164 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 OR2T35Q8NGX2 323 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 SGTBQ96EQ0 304 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 PIGUQ9H490 435 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 DZANK1Q9NVP4 752 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 RCE1Q9Y256 329 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 SLC35A3Q9Y2D2 325 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 KIAA1549LQ6ZVL6 1849 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 BHLHE40O14503 412 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 XKRYO14609 159 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 OR7A10O76100 309 aa12.25□□□□□ -0.45
COL6A2-204ENST00000409416 DNASE1P24855 282 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms