RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 IFNGR2P38484 337 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 GSSP48637 474 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 SLC9A3P48764 834 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 FXYD6P3P58550 94 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 H3F3AP84243 136 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 MS4A18Q3C1V0 323 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 CLEC12AQ5QGZ9 265 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 PAQR6Q6TCH4 344 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 KLHL17Q6TDP4 642 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 THSD4Q6ZMP0 1018 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 Q6ZPB1 254 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 TMPRSS11FQ6ZWK6 438 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 H1FNTQ75WM6 255 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 SVOPLQ8N434 492 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 GALNT4Q8N4A0 578 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 MARVELD2Q8N4S9 558 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 FANK1Q8TC84 345 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 MAGEE2Q8TD90 523 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 SDCCAG3Q96C92 435 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 ZHX1-C8orf76Q96EF9 292 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 PLA2G12AQ9BZM1 189 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 TAS2R5Q9NYW4 299 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 ZNF229Q9UJW7 825 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 MGAT4BQ9UQ53 548 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 PHF3Q92576 2039 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 AQP7P3A6NL99 342 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 MCIDASD6RGH6 385 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 WDR1O75083 606 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 TOXO94900 526 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 OR6A2O95222 327 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 FPR3P25089 353 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 POU1F1P28069 291 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 SIRPAP78324 504 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 RASGEF1BQ0VAM2 473 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 PMPCAQ10713 525 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 TSPAN31Q12999 210 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 TOP3AQ13472 1001 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 ZBED5Q49AG3 693 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 ZBTB49Q6ZSB9 765 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 ADGRE4PQ86SQ3 457 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 FJX1Q86VR8 437 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 WDFY1Q8IWB7 410 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 RNF128Q8TEB7 428 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 INTS12Q96CB8 462 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 SAMD8Q96LT4 415 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 NAA11Q9BSU3 229 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 VCX3BQ9H321 246 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 TP63Q9H3D4 680 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 MRPL39Q9NYK5 338 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 B3GAT1Q9P2W7 334 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 SIGLEC7Q9Y286 467 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 POLEQ07864 2286 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 RELNP78509 3460 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 PCNX1Q96RV3 2341 aa12.57□□□□□ -0.4
CHRNA1-204ENST00000409323 ADAP00813 363 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 TP53P04637 393 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 GABRA1P14867 456 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 RPL4P36578 427 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 POU3F1Q03052 451 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 PUDPQ08623 228 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 DBPQ10586 325 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 FOXF2Q12947 444 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 MELKQ14680 651 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 ZIK1Q3SY52 487 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 SLC36A3Q495N2 470 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 EEF1A1P5Q5VTE0 462 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 NSUN5P2Q63ZY6 315 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 ABLIM2Q6H8Q1 611 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 FAHD1Q6P587 224 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 B3GNT6Q6ZMB0 384 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 TUSC5Q8IXB3 177 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 IQCF1Q8N6M8 205 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 NAXEQ8NCW5 288 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 OR8D4Q8NGM9 314 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 OR6S1Q8NH40 331 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 NRBF2Q96F24 287 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 TXNDC15Q96J42 360 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 ZNF385AQ96PM9 386 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 TTYH2Q9BSA4 534 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 EMC6Q9BV81 110 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 DGCR6LQ9BY27 220 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 UCK2Q9BZX2 261 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 OR52D1Q9H346 318 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 CALHM2Q9HA72 323 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 ZNF556Q9HAH1 456 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 MED29Q9NX70 200 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 TMEFF2Q9UIK5 374 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 ING1Q9UK53 422 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 ADAM18Q9Y3Q7 739 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 CORINQ9Y5Q5 1042 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 H3BN98 237 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 CCL21O00585 134 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 EIF1BO60739 113 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 CYTIPO60759 359 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 PTP4A3O75365 173 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 GLI4P10075 376 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 ANXA8P13928 327 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 IGFBP5P24593 272 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 EDNRAP25101 427 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms