RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 EPHX4Q8IUS5 362 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 CLIP4Q8N3C7 705 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 MREGQ8N565 214 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 GLB1L3Q8NCI6 653 aaPredicted RBP7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 MAGEE2Q8TD90 523 aaPredicted RBP7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 MSI2Q96DH6 328 aaKnown RBP7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 ZBTB18Q99592 522 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 VRK1Q99986 396 aaPredicted RBP7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 MYOZ1Q9NP98 299 aaPredicted RBP7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 KCNK9Q9NPC2 374 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 SLC6A13Q9NSD5 602 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 CALML5Q9NZT1 146 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 CRNNQ9UBG3 495 aaPredicted RBP7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 P2RX2Q9UBL9 471 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 ZNF232Q9UNY5 417 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 RASD1Q9Y272 281 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 HEATR1Q9H583 2144 aaKnown RBP7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 DSPPQ9NZW4 1301 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 NOTCH1P46531 2555 aa7.97□□□□□ -1.13
NIF3L1-203ENST00000409129 A0A096LPE4 126 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 A0A096LPI6 279 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 IGHV4-61A0A0C4DH41 118 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 A0A0G2JPF8 293 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 A0A1W2PPZ6 126 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 HNRNPCL2B2RXH8 293 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 HNRNPCL3B7ZW38 293 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 FRS3O43559 492 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 HNRNPCL1O60812 293 aaKnown RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 NPIPB7O75200 414 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 UPK3AO75631 287 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 PDE5AO76074 875 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 IL6P05231 212 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 BCHEP06276 602 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 OR4A8P0C604 315 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 HNRNPCL4P0DMR1 293 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 PRG2P13727 222 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 APEHP13798 732 aaKnown RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 ETFAP13804 333 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 NCF2P19878 526 aaPredicted RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 EPHA3P29320 983 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 CRATP43155 626 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 CRISP3P54108 245 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 TUBA1BP68363 451 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 TUBA4AP68366 448 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 NAAAQ02083 359 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 LARS2Q15031 903 aaKnown RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 EFNB3Q15768 340 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 ADIPOQQ15848 244 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 IQCCQ4KMZ1 466 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 PDLIM3Q53GG5 364 aaPredicted RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 RNF220Q5VTB9 566 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 PRAMEF8Q5VWM4 474 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 PRAMEF7Q5VXH5 474 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 NIPAL3Q6P499 406 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 VHLLQ6RSH7 139 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 TUBA1AQ71U36 451 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 LINGO2Q7L985 606 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 FAM169BQ8N8A8 192 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 ANKS4BQ8N8V4 417 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 ZNF540Q8NDQ6 660 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 OR4F15Q8NGB8 312 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 MFSD8Q8NHS3 518 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 STK35Q8TDR2 534 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 SLC38A5Q8WUX1 472 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 C3orf49Q96BT1 292 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 C1orf159Q96HA4 380 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 ZNF317Q96PQ6 595 aaPredicted RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 ALKBH3Q96Q83 286 aaPredicted RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 PAIP2Q9BPZ3 127 aaKnown RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 SPATA9Q9BWV2 254 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 LINC00470Q9BZP3 86 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 PLK3Q9H4B4 646 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 ARMC7Q9H6L4 198 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 WDR55Q9H6Y2 383 aaPredicted RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 CHODLQ9H9P2 273 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 TPT1P8Q9HAU6 139 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 MOV10Q9HCE1 1003 aaKnown RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 FBXO9Q9UK97 447 aaPredicted RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 ZNF443Q9Y2A4 671 aaPredicted RBP7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 CHST2Q9Y4C5 530 aa7.96□□□□□ -1.14
NIF3L1-203ENST00000409129 TRPC5OSA6NMA1 111 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 VSTM5A8MXK1 200 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 FTCDNL1E5RQL4 147 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 RPL36A-HNRNPH2H7BZ11 118 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 HDAC3O15379 428 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 SLC22A3O75751 556 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 AHSA1O95433 338 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 ANP32DO95626 131 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 TGFAP01135 160 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 IGLV1-44P01699 117 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 CECR9P0C854 216 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 ZCCHC18P0CG32 403 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 IDO1P14902 403 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 CBR1P16152 277 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 ZNF23P17027 643 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 HNF1AP20823 631 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 CALCRP30988 508 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 PPOXP50336 477 aa7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 IDH3GP51553 393 aaPredicted RBP7.95□□□□□ -1.14
NIF3L1-203ENST00000409129 SH3BGRP55822 239 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms