RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ZPLD1Q8TCW7 415 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 TNFAIP8L1Q8WVP5 186 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 ZNF707Q96C28 371 aaPredicted RBP12.82□□□□□ -0.36
APOB-202ENST00000399256 TMEM27Q9HBJ8 222 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 FLRT3Q9NZU0 649 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 MRTO4Q9UKD2 239 aaKnown RBP12.82□□□□□ -0.36
APOB-202ENST00000399256 ICAM5Q9UMF0 924 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 MOKQ9UQ07 419 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 OR6C74A6NCV1 312 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 MCIDASD6RGH6 385 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 CXCL14O95715 111 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 LDOC1O95751 146 aaPredicted RBP12.82□□□□□ -0.36
APOB-202ENST00000399256 P2RY2P41231 377 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 FHL1Q13642 323 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 TCEA2Q15560 299 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 YOD1Q5VVQ6 348 aaPredicted RBP12.82□□□□□ -0.36
APOB-202ENST00000399256 C7orf61Q8IZ16 206 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 POMGNT2Q8NAT1 580 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 TMIEQ8NEW7 156 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 PXT1Q8NFP0 134 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 OR4K14Q8NGD5 310 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
APOB-202ENST00000399256 TMEM74BQ9NUR3 256 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 ZNF281Q9Y2X9 895 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 PRR32B1ATL7 298 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 RAB40ALP0C0E4 278 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 ADH5P11766 374 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 RPS4Y1P22090 263 aaKnown RBP12.81□□□□□ -0.36
APOB-202ENST00000399256 ACHEP22303 614 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 MECP2P51608 486 aaKnown RBP12.81□□□□□ -0.36
APOB-202ENST00000399256 PON3Q15166 354 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 RBMS2Q15434 407 aaKnown RBP12.81□□□□□ -0.36
APOB-202ENST00000399256 HNRNPA1L2Q32P51 320 aaKnown RBP12.81□□□□□ -0.36
APOB-202ENST00000399256 TSSK4Q6SA08 328 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 ZAR1Q86SH2 424 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 RAB40AQ8WXH6 277 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 NMNAT3Q96T66 252 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 ZBP1Q9H171 429 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 TCF7L1Q9HCS4 588 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 MBNL1Q9NR56 388 aaKnown RBP12.81□□□□□ -0.36
APOB-202ENST00000399256 TMEM272A0A1B0GTI8 110 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 A0A1B0GWA3 101 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 GPRIN2O60269 458 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 SNAPC5O75971 98 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 MST1P26927 711 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 MRPS10P82664 201 aaKnown RBP12.81□□□□□ -0.36
APOB-202ENST00000399256 CLVS2Q5SYC1 327 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 TMPRSS12Q86WS5 348 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 GLB1L2Q8IW92 636 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 EIF4E3Q8N5X7 224 aaKnown RBP12.81□□□□□ -0.36
APOB-202ENST00000399256 BOLLQ8N9W6 283 aaKnown RBP12.81□□□□□ -0.36
APOB-202ENST00000399256 LSM14AQ8ND56 463 aaKnown RBP12.81□□□□□ -0.36
APOB-202ENST00000399256 OR10K1Q8NGX5 313 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 OR14A16Q8NHC5 309 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 MIB2Q96AX9 1013 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 CHRNA9Q9UGM1 479 aa12.81□□□□□ -0.36
APOB-202ENST00000399256 SMAD9O15198 467 aaKnown RBP12.8□□□□□ -0.36
APOB-202ENST00000399256 ADAM11O75078 769 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 CDC123O75794 336 aaPredicted RBP12.8□□□□□ -0.36
APOB-202ENST00000399256 RHOP08100 348 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 ADRA2CP18825 462 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 GMFBP60983 142 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 TNFRSF17Q02223 184 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 GUCA2AQ02747 115 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 LGALS3BPQ08380 585 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 ELAVL3Q14576 367 aaKnown RBP12.8□□□□□ -0.36
APOB-202ENST00000399256 TMEM240Q5SV17 173 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 ELP2Q6IA86 826 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 STAC2Q6ZMT1 411 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 MAMSTRQ6ZN01 415 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 MFSD9Q8NBP5 474 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 NARS2Q96I59 477 aaKnown RBP12.8□□□□□ -0.36
APOB-202ENST00000399256 LRRC3BQ96PB8 259 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 PBX4Q9BYU1 374 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 TRPV4Q9HBA0 871 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 ZNF346Q9UL40 294 aaKnown RBP12.8□□□□□ -0.36
APOB-202ENST00000399256 PRELID3BQ9Y3B1 194 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 ZNF175Q9Y473 711 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 GXYLT2A0PJZ3 443 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 ZNF860A6NHJ4 632 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 LRRC72A6NJI9 287 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 PRAMEF2O60811 474 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 RBBP9O75884 186 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 FGF18O76093 207 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 MPGP29372 298 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 RPL4P36578 427 aaKnown RBP12.8□□□□□ -0.36
APOB-202ENST00000399256 ILF3Q12906 894 aaKnown RBP eCLIP12.8□□□□□ -0.363e-10■□□□□ 9.8
APOB-202ENST00000399256 EXOSC7Q15024 291 aaKnown RBP12.8□□□□□ -0.36
APOB-202ENST00000399256 DEFB134Q4QY38 66 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 C4orf46Q504U0 113 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 LRRN1Q6UXK5 716 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 TMEFF1Q8IYR6 380 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 DND1Q8IYX4 353 aaKnown RBP12.8□□□□□ -0.36
APOB-202ENST00000399256 ATOH1Q92858 354 aaPredicted RBP12.8□□□□□ -0.36
APOB-202ENST00000399256 CHST6Q9GZX3 395 aa12.8□□□□□ -0.36
APOB-202ENST00000399256 A0A0B4J2E0 115 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 EDDM13A0A1B0GTR0 161 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 A0A1B0GX12 115 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 CTNSO60931 367 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 AQP8O94778 261 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms