RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 LILRB1Q8NHL6 650 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 NMNAT3Q96T66 252 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 PRSS27Q9BQR3 290 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 PDCD10Q9BUL8 212 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 PTDSS2Q9BVG9 487 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 ULBP3Q9BZM4 244 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 TMEM231Q9H6L2 316 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 SCPEP1Q9HB40 452 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 TCF7L1Q9HCS4 588 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 AKAP7Q9P0M2 348 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 PRELID3BQ9Y3B1 194 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 MED31Q9Y3C7 131 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 PLEKHM1Q9Y4G2 1056 aa9.07□□□□□ -0.96
PTCHD4-202ENST00000398738 IGKV1-8A0A0C4DH67 115 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 A0A1W2PQ45 241 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 A0A1W2PQY0 241 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 SYT5O00445 386 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 DNAJB6O75190 326 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 ECDO95905 644 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 ASGR2P07307 311 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 C8AP07357 584 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 CBR1P16152 277 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 NTHL1P78549 312 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 SERTAD2Q14140 314 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 TSSK4Q6SA08 328 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 RNF44Q7L0R7 432 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 LNX2Q8N448 690 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 OR5M9Q8NGP3 310 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 SMIM19Q96E16 107 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 CPNE2Q96FN4 548 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 PELOQ9BRX2 385 aaKnown RBP9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 ACTRT3Q9BYD9 372 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 SLC6A17Q9H1V8 727 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 IL21RQ9HBE5 538 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 EXOSC3Q9NQT5 275 aaKnown RBP9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 OR5V1Q9UGF6 321 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 GLS2Q9UI32 602 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 FBXO4Q9UKT5 387 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 V9GY05 133 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 RANBP2P49792 3224 aaKnown RBP9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 TCF20Q9UGU0 1960 aaKnown RBP9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 OR2M5A3KFT3 312 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 LRRC72A6NJI9 287 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 KLF4O43474 513 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 TGM5O43548 720 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 CDC123O75794 336 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 RBBP9O75884 186 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 LDOC1O95751 146 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 OR8G3PP0DMU2 310 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 GALP22466 123 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 TAS2R20P59543 309 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 TEAD2Q15562 447 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 IGSF11Q5DX21 431 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 PRRT3Q5FWE3 981 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 UNQ6126/PRO20091Q6UXV3 157 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 SDR16C5Q8N3Y7 309 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 FAM71CQ8NEG0 241 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 OR2AK2Q8NG84 335 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 OR4C16Q8NGL9 310 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 LMLNQ96KR4 655 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 GFI1Q99684 422 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 SYNDIG1Q9H7V2 258 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 FANCFQ9NPI8 374 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 MEPEQ9NQ76 525 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 SPHK2Q9NRA0 654 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 ASF1BQ9NVP2 202 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 C2orf42Q9NWW7 574 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 RNF186Q9NXI6 227 aa9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 ABT1Q9ULW3 272 aaKnown RBP9.06□□□□□ -0.96
PTCHD4-202ENST00000398738 TRAV18A0A075B6X5 111 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF879B4DU55 563 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 CACNB4O00305 520 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 B3GALNT1O75752 331 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 PCDH8O95206 1070 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 MST1P26927 711 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF136P52737 540 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 RPS11P62280 158 aaKnown RBP eCLIP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 UBE2IP63279 158 aaKnown RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 MAT1AQ00266 395 aaKnown RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 REEP5Q00765 189 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 TRAM1Q15629 374 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 ZCCHC12Q6PEW1 402 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 SFTPA1Q8IWL2 248 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 SLC35F2Q8IXU6 374 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 CMIPQ8IY22 773 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 HERVK_113Q902F9 699 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 MS4A6EQ96DS6 147 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 MTHFD2LQ9H903 347 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 MRPS30Q9NP92 439 aaKnown RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 IKZF2Q9UKS7 526 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 FARSAQ9Y285 508 aaKnown RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 SIGLEC7Q9Y286 467 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 PLEKHA6Q9Y2H5 1048 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 RNF215Q9Y6U7 377 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 A0A1W2PPV9 198 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 NDUFA2O43678 99 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 GMFGO60234 142 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 DOK2O60496 412 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 PRAMEF2O60811 474 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 LDB3O75112 727 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms