RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ARHGAP11AQ6P4F7 1023 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 AVL9Q8NBF6 648 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CYB561A3Q8NBI2 242 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SP7Q8TDD2 431 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 MARC2Q969Z3 335 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ZBTB8AQ96BR9 441 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SEC22AQ96IW7 307 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SPACA7Q96KW9 195 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ALX4Q9H161 411 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SLC22A11Q9NSA0 550 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 GRHPRQ9UBQ7 328 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 A0A0D9SG52 128 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SLC9B1P1A6NJY1 282 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ACOT7O00154 380 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 NME2P22392 152 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 DUSP8Q13202 625 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 KIR2DS3Q14952 304 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CHRFAM7AQ494W8 412 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ENPP7Q6UWV6 458 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 RFLNAQ6ZTI6 216 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 NAA40Q86UY6 237 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 NRROSQ86YC3 692 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 OR2L13Q8N349 312 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 OR10R2Q8NGX6 335 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 OR10Z1Q8NGY1 313 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 TERB2Q8NHR7 220 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 DOK4Q8TEW6 326 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 RSC1A1Q92681 617 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 FOXRED1Q96CU9 486 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF578Q96N58 590 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 OR5B12Q96R08 314 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 DPH7Q9BTV6 452 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 TEX101Q9BY14 249 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 PRDM7Q9NQW5 492 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 TUBG2Q9NRH3 451 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 KIF25Q9UIL4 384 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 DHDHQ9UQ10 334 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 MAP1BP46821 2468 aaKnown RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 BLACEA4D250 179 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 TNFRSF10CO14798 259 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 PPP1R3DO95685 299 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ERCC1P07992 297 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 RAB40ALP0C0E4 278 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 UBE2IP63279 158 aaKnown RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 DHCR24Q15392 516 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 MAPK14Q16539 360 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CDONQ4KMG0 1287 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ASTLQ6HA08 431 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 TCEAL6Q6IPX3 200 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 PNLDC1Q8NA58 520 aaKnown RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 LGALS14Q8TCE9 139 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 RAB40AQ8WXH6 277 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SUSD6Q92537 303 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SLAMF9Q96A28 289 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ZMYND19Q96E35 227 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CNRIP1Q96F85 164 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SCARF2Q96GP6 870 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 C4orf36Q96KX1 117 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CMKLR1Q99788 373 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 TMEM121BQ9BXQ6 578 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 KCNJ16Q9NPI9 418 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ADAM18Q9Y3Q7 739 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 TANC1Q9C0D5 1861 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 FAM171A2A8MVW0 826 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 RAD52P43351 418 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MAGEB1P43366 347 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 UBE2NLQ5JXB2 153 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 B3GNTL1Q67FW5 361 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 FIGNL1Q6PIW4 674 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 PRSS45Q7RTY3 260 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 UCN3Q969E3 161 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SORCS2Q96PQ0 1159 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF701Q9NV72 531 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SERTAD3Q9UJW9 196 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 CES1P1Q9UKY3 287 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SLC7A7Q9UM01 511 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 A0A1W2PRU2 124 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 FAM183AA6NL82 134 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SBK2P0C263 348 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 PRSS3P35030 304 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MEOX2P50222 304 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 IDH3GP51553 393 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SEC61A1P61619 476 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 DGCR2P98153 550 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ID2Q02363 134 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 TOMM20Q15388 145 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SYPL1Q16563 259 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 PLEKHN1Q494U1 663 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SPIN3Q5JUX0 258 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 OR4C11Q6IEV9 310 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 RPL22L1Q6P5R6 122 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SUMF2Q8NBJ7 301 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 OR2AJ1Q8NGZ0 328 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ADAMTS18Q8TE60 1221 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MYLIPQ8WY64 445 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MS4A6EQ96DS6 147 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 F2RL3Q96RI0 385 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 TCEAL2Q9H3H9 227 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 TAS2R8Q9NYW2 309 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms