RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ABCE1P61221 599 aaKnown RBP18.26■□□□□ 0.51
TRAF4-203ENST00000394925 UFM1P61960 85 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 TXNL4AP83876 142 aaKnown RBP18.26■□□□□ 0.51
TRAF4-203ENST00000394925 NPRL3Q12980 569 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 CHI3L2Q15782 390 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 LIN52Q52LA3 116 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 SLC25A36Q96CQ1 311 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 C20orf27Q9GZN8 174 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 TPK1Q9H3S4 243 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 RAP2CQ9Y3L5 183 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 NPIPB7O75200 414 aa18.25■□□□□ 0.51
TRAF4-203ENST00000394925 VENTXO95231 258 aa18.25■□□□□ 0.51
TRAF4-203ENST00000394925 SERPINE1P05121 402 aa18.25■□□□□ 0.51
TRAF4-203ENST00000394925 PRG2P13727 222 aa18.25■□□□□ 0.51
TRAF4-203ENST00000394925 NCF2P19878 526 aaPredicted RBP18.25■□□□□ 0.51
TRAF4-203ENST00000394925 RPL14P50914 215 aaKnown RBP18.25■□□□□ 0.51
TRAF4-203ENST00000394925 DVL1P1P54792 670 aaPredicted RBP18.25■□□□□ 0.51
TRAF4-203ENST00000394925 MAPK11Q15759 364 aa18.25■□□□□ 0.51
TRAF4-203ENST00000394925 ATG16L1Q676U5 607 aa18.25■□□□□ 0.51
TRAF4-203ENST00000394925 UGT2A3Q6UWM9 527 aa18.25■□□□□ 0.51
TRAF4-203ENST00000394925 NUF2Q9BZD4 464 aa18.25■□□□□ 0.51
TRAF4-203ENST00000394925 ZNF503-AS2A6NEH8 195 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 RPL36A-HNRNPH2H7BZ11 118 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 WIPF1O43516 503 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 AHSA1O95433 338 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 PNMTP11086 282 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 ZNF43P17038 809 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 ARR3P36575 388 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 IL1RL1Q01638 556 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 SNTB2Q13425 540 aaKnown RBP18.24■□□□□ 0.51
TRAF4-203ENST00000394925 DAG1Q14118 895 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 KRT80Q6KB66 452 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 MDP1Q86V88 176 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 LRRC34Q8IZ02 419 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 CLIP4Q8N3C7 705 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRAF4-203ENST00000394925 ZNF837Q96EG3 531 aaPredicted RBP18.24■□□□□ 0.51
TRAF4-203ENST00000394925 OR52E6Q96RD3 313 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 METTL17Q9H7H0 456 aaPredicted RBP18.24■□□□□ 0.51
TRAF4-203ENST00000394925 CRLF2Q9HC73 371 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 GPR35Q9HC97 309 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 PRDM4Q9UKN5 801 aa18.24■□□□□ 0.51
TRAF4-203ENST00000394925 ZNF443Q9Y2A4 671 aaPredicted RBP18.24■□□□□ 0.51
TRAF4-203ENST00000394925 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.24■□□□□ 0.51
TRAF4-203ENST00000394925 A0A096LPI6 279 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 SLC43A1O75387 559 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 ZNF432O94892 652 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 PCMT1P22061 227 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 GTF2E2P29084 291 aaKnown RBP18.23■□□□□ 0.51
TRAF4-203ENST00000394925 IL12AP29459 219 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 RPS5P46782 204 aaKnown RBP18.23■□□□□ 0.51
TRAF4-203ENST00000394925 CAPZA2P47755 286 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 CEACAM16Q2WEN9 425 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 GPR137CQ8N3F9 429 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 MFSD8Q8NHS3 518 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 STK35Q8TDR2 534 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 SORT1Q99523 831 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 ROPN1BQ9BZX4 212 aaPredicted RBP18.23■□□□□ 0.51
TRAF4-203ENST00000394925 ROPN1Q9HAT0 212 aaPredicted RBP18.23■□□□□ 0.51
TRAF4-203ENST00000394925 NOX3Q9HBY0 568 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 P2RX2Q9UBL9 471 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 SEC14L4Q9UDX3 406 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 RCE1Q9Y256 329 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 CMAHPQ9Y471 501 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 DSPPQ9NZW4 1301 aa18.23■□□□□ 0.51
TRAF4-203ENST00000394925 B4DSR2 109 aa18.22■□□□□ 0.51
TRAF4-203ENST00000394925 FTCDNL1E5RQL4 147 aa18.22■□□□□ 0.51
TRAF4-203ENST00000394925 SPRY1O43609 319 aaPredicted RBP18.22■□□□□ 0.51
TRAF4-203ENST00000394925 SEC14L2O76054 403 aa18.22■□□□□ 0.51
TRAF4-203ENST00000394925 KRT75O95678 551 aa18.22■□□□□ 0.51
TRAF4-203ENST00000394925 ALDOCP09972 364 aaKnown RBP18.22■□□□□ 0.51
TRAF4-203ENST00000394925 SLC1A6P48664 564 aa18.22■□□□□ 0.51
TRAF4-203ENST00000394925 SERPINA11Q86U17 422 aa18.22■□□□□ 0.51
TRAF4-203ENST00000394925 GLCCI1Q86VQ1 547 aa18.22■□□□□ 0.51
TRAF4-203ENST00000394925 ANKK1Q8NFD2 765 aa18.22■□□□□ 0.51
TRAF4-203ENST00000394925 PTDSS2Q9BVG9 487 aa18.22■□□□□ 0.51
TRAF4-203ENST00000394925 CALML5Q9NZT1 146 aa18.22■□□□□ 0.51
TRAF4-203ENST00000394925 A0A0A6YYJ9 748 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 SLCO1B7G3V0H7 640 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 BCHEP06276 602 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 ETFAP13804 333 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 C1DQ13901 141 aaKnown RBP18.21■□□□□ 0.51
TRAF4-203ENST00000394925 LARS2Q15031 903 aaKnown RBP18.21■□□□□ 0.51
TRAF4-203ENST00000394925 RPS26P11Q5JNZ5 115 aaPredicted RBP18.21■□□□□ 0.51
TRAF4-203ENST00000394925 RNF220Q5VTB9 566 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 IL17RDQ8NFM7 739 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 SEMA6DQ8NFY4 1073 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 KTI12Q96EK9 354 aaPredicted RBP18.21■□□□□ 0.51
TRAF4-203ENST00000394925 OXGR1Q96P68 337 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 NARFLQ9H6Q4 476 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 MEAF6Q9HAF1 191 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 SLC6A13Q9NSD5 602 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 AIG1Q9NVV5 245 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 ZNF232Q9UNY5 417 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 USP22Q9UPT9 525 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 CHST2Q9Y4C5 530 aa18.21■□□□□ 0.51
TRAF4-203ENST00000394925 RFXANKO14593 260 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 TCN1P20061 433 aaPredicted RBP18.2■□□□□ 0.5
TRAF4-203ENST00000394925 CRATP43155 626 aa18.2■□□□□ 0.5
TRAF4-203ENST00000394925 CRISP3P54108 245 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms