RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SMIM28A0A1B0GU29 152 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 CLDN24A6NM45 220 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 ZNF727A8MUV8 499 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 HTR2CP28335 458 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 C3orf38Q5JPI3 329 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 OR13C8Q8NGS7 320 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 RIMS4Q9H426 269 aaPredicted RBP12.55□□□□□ -0.4
USP49-203ENST00000394253 ZNF256Q9Y2P7 627 aaPredicted RBP12.55□□□□□ -0.4
USP49-203ENST00000394253 TUSC1Q2TAM9 212 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 OR13D1Q8NGV5 346 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 SLC7A7Q9UM01 511 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 LYPLA2O95372 231 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 MPGP29372 298 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 DUSP3P51452 185 aaPredicted RBP12.55□□□□□ -0.4
USP49-203ENST00000394253 C17orf107Q6ZR85 190 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 H2BFWTQ7Z2G1 175 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 CDH26Q8IXH8 852 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 OBP2BQ9NPH6 170 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 C1GALT1Q9NS00 363 aa12.55□□□□□ -0.4
USP49-203ENST00000394253 LRRC30A6NM36 301 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 CARD18P57730 90 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 OVCH1Q7RTY7 1134 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 OR2A1Q8NGT9 310 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 ACSS1Q9NUB1 689 aaPredicted RBP12.54□□□□□ -0.4
USP49-203ENST00000394253 B3GAT1Q9P2W7 334 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 GPRIN2O60269 458 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 HSBP1O75506 76 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 HMGCLP35914 325 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 CSNK1A1P48729 337 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 TBPL1P62380 186 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 RPS15P62841 145 aaKnown RBP12.54□□□□□ -0.4
USP49-203ENST00000394253 TMUB2Q71RG4 321 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 OR11L1Q8NGX0 322 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 TMEM43Q9BTV4 400 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 C11orf49Q9H6J7 331 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 MN1Q10571 1320 aaPredicted RBP12.54□□□□□ -0.4
USP49-203ENST00000394253 MCM3APO60318 1980 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 ACRV1P26436 265 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 GGT5P36269 586 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 OR10A3P58181 314 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 FABP9Q0Z7S8 132 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 SERTAD2Q14140 314 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 FAM182AQ5T1J6 154 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 UQCC3Q6UW78 93 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 TOMM20LQ6UXN7 152 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 PRSS35Q8N3Z0 413 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 CLEC1AQ8NC01 280 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 OR10J5Q8NHC4 309 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 SH2D7A6NKC9 451 aaPredicted RBP12.54□□□□□ -0.4
USP49-203ENST00000394253 MAP2K6P52564 334 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 NHLH1Q02575 133 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 NHLH2Q02577 135 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 OPN5Q6U736 354 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 CSNK1A1LQ8N752 337 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 UBAC2Q8NBM4 344 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 SMOC2Q9H3U7 446 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 AGPAT4Q9NRZ5 378 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 APEHP13798 732 aaKnown RBP12.54□□□□□ -0.4
USP49-203ENST00000394253 BCL7AQ4VC05 210 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 OR4C11Q6IEV9 310 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 OTOP2Q7RTS6 562 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 ZMYND19Q96E35 227 aaPredicted RBP12.54□□□□□ -0.4
USP49-203ENST00000394253 SLC35E1Q96K37 410 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 ACTR3CQ9C0K3 210 aaPredicted RBP12.54□□□□□ -0.4
USP49-203ENST00000394253 PTBP1P26599 531 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP49-203ENST00000394253 CD1CP29017 333 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 SELENOWP63302 87 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 PRRT3Q5FWE3 981 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 FTSJ1Q9UET6 329 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.54□□□□□ -0.42e-7■■■■■ 27.8
USP49-203ENST00000394253 IQSEC2Q5JU85 1478 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 C4orf47A7E2U8 309 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 RPS26P62854 115 aaKnown RBP12.54□□□□□ -0.4
USP49-203ENST00000394253 ZNF534Q76KX8 674 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 LGI3Q8N145 548 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 NECAP1Q8NC96 275 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 TMEM239Q8WW34 195 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 DYRK2Q92630 601 aa12.54□□□□□ -0.4
USP49-203ENST00000394253 C11orf84Q9BUA3 381 aaPredicted RBP12.54□□□□□ -0.4
USP49-203ENST00000394253 FOXE1O00358 373 aaPredicted RBP12.53□□□□□ -0.4
USP49-203ENST00000394253 NUDT21O43809 227 aaKnown RBP12.53□□□□□ -0.4
USP49-203ENST00000394253 FKBP1AP62942 108 aaKnown RBP12.53□□□□□ -0.4
USP49-203ENST00000394253 METTL9Q9H1A3 318 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 SPACA1Q9HBV2 294 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 GABRPO00591 440 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 TCTAP57738 103 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 PPP2CBP62714 309 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 HAGHQ16775 308 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 THNSL2Q86YJ6 484 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 CELF5Q8N6W0 485 aaKnown RBP12.53□□□□□ -0.4
USP49-203ENST00000394253 HUS1BQ8NHY5 278 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 GSX2Q9BZM3 304 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 PLEKHF2Q9H8W4 249 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 INIPQ9NRY2 104 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 PLAGL1Q9UM63 463 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 EXOGQ9Y2C4 368 aaKnown RBP12.53□□□□□ -0.4
USP49-203ENST00000394253 LRRC3CA6NJW4 275 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 RTL8BQ17RB0 113 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 CDC20BQ86Y33 519 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 OR8J2Q8NGG1 315 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms