RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 NANSQ9NR45 359 aa11.82□□□□□ -0.52
USP44-202ENST00000393091 TMEFF2Q9UIK5 374 aaPredicted RBP11.82□□□□□ -0.52
USP44-202ENST00000393091 A0A1W2PNR3 127 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 ZNF814B7Z6K7 855 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 G3V2T6 193 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 ARHGDIAP52565 204 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 B3GNT6Q6ZMB0 384 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 DPY19L2P2Q6ZN68 376 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 CREB3L2Q70SY1 520 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 ZNF627Q7L945 461 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 INTS12Q96CB8 462 aaKnown RBP11.81□□□□□ -0.52
USP44-202ENST00000393091 ZNF845Q96IR2 970 aaPredicted RBP11.81□□□□□ -0.52
USP44-202ENST00000393091 RNPEPL1Q9HAU8 725 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 NRIP3Q9NQ35 241 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 EMC3Q9P0I2 261 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 POFUT2Q9Y2G5 429 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 H0YC42 278 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 RPL36A-HNRNPH2H7BZ11 118 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 TRAF3IP2O43734 574 aaPredicted RBP11.81□□□□□ -0.52
USP44-202ENST00000393091 TNFSF13O75888 250 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 SFTPDP35247 375 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 TPD52P55327 224 aaPredicted RBP11.81□□□□□ -0.52
USP44-202ENST00000393091 ESRRGP62508 458 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 PUDPQ08623 228 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 OR7A5Q15622 319 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 OTUD3Q5T2D3 398 aaPredicted RBP11.81□□□□□ -0.52
USP44-202ENST00000393091 OR9K2Q8NGE7 335 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 ZNF519Q8TB69 540 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 RBM4BQ9BQ04 359 aaKnown RBP11.81□□□□□ -0.52
USP44-202ENST00000393091 C9orf16Q9BUW7 83 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 RBM4Q9BWF3 364 aaKnown RBP11.81□□□□□ -0.52
USP44-202ENST00000393091 FLVCR1Q9Y5Y0 555 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 CDH10Q9Y6N8 788 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 M0R082 166 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 TGM6O95932 706 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 ALPLP05186 524 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 YES1P07947 543 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 GTF3C1Q12789 2109 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 RFX4Q33E94 735 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 FGD3Q5JSP0 725 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 SMARCD3Q6STE5 483 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 ZNF771Q7L3S4 317 aaPredicted RBP11.81□□□□□ -0.52
USP44-202ENST00000393091 C9orf106Q8NAJ2 232 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 ZNF417Q8TAU3 575 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 TMEM54Q969K7 222 aa11.81□□□□□ -0.52
USP44-202ENST00000393091 ZNF587Q96SQ5 575 aaPredicted RBP11.81□□□□□ -0.52
USP44-202ENST00000393091 CH25HO95992 272 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 TFPIP10646 304 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 CTSSP25774 331 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 AGTR1P30556 359 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 EIF1AXP47813 144 aaKnown RBP11.8□□□□□ -0.52
USP44-202ENST00000393091 DAPP51397 102 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 NUP107P57740 925 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 LSM11P83369 360 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP44-202ENST00000393091 EFNB1P98172 346 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 PON3Q15166 354 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 ARMC4Q5T2S8 1044 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 ZDHHC13Q8IUH4 622 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 OR6X1Q8NH79 312 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 NMD3Q96D46 503 aaKnown RBP11.8□□□□□ -0.52
USP44-202ENST00000393091 MED12LQ86YW9 2145 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 ALDH3A2P51648 485 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 CDK5Q00535 292 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 GPR139Q6DWJ6 353 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 KLHL17Q6TDP4 642 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 KIF18BQ86Y91 864 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 TMEM123Q8N131 208 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 TMEM99Q8N816 258 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 FNDC8Q8TC99 324 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 DDOQ99489 341 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 FEVQ99581 238 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 MRPL13Q9BYD1 178 aaKnown RBP11.8□□□□□ -0.52
USP44-202ENST00000393091 UCK2Q9BZX2 261 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 TXNIPQ9H3M7 391 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 SMURF2Q9HAU4 748 aa11.8□□□□□ -0.52
USP44-202ENST00000393091 FOXD3Q9UJU5 478 aaPredicted RBP11.8□□□□□ -0.52
USP44-202ENST00000393091 BHLHE40O14503 412 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 AQP8O94778 261 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 NDUFB2O95178 105 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 OSMP13725 252 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 PLA2G2AP14555 144 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 GRK5P34947 590 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 OR3A2P47893 321 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 FOXL2NBQ6ZUU3 175 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 FAM214BQ7L5A3 538 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 FAM46AQ96IP4 442 aaKnown RBP11.79□□□□□ -0.52
USP44-202ENST00000393091 PDP1Q9P0J1 537 aaPredicted RBP11.79□□□□□ -0.52
USP44-202ENST00000393091 RRP15Q9Y3B9 282 aaKnown RBP11.79□□□□□ -0.52
USP44-202ENST00000393091 HCFC1P51610 2035 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 PDLIM1O00151 329 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 PRB1P04280 392 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 KIR2DL2P43627 348 aaPredicted RBP11.79□□□□□ -0.52
USP44-202ENST00000393091 SLC34A1Q06495 639 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 RPL18Q07020 188 aaKnown RBP11.79□□□□□ -0.52
USP44-202ENST00000393091 SLC25A35Q3KQZ1 300 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 NRN1LQ496H8 165 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 CHMP1BQ7LBR1 199 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 RRM2BQ7LG56 351 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 LNX2Q8N448 690 aa11.79□□□□□ -0.52
USP44-202ENST00000393091 AQP11Q8NBQ7 271 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms