RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 FAM169BQ8N8A8 192 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 LSMEM1Q8N8F7 131 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 ELOA3Q8NG57 546 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 OR9I1Q8NGQ6 314 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 LRRC8CQ8TDW0 803 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 CCDC28BQ9BUN5 200 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 KATNB1Q9BVA0 655 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 SELENONQ9NZV5 590 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 GMEB1Q9Y692 573 aa11.36□□□□□ -0.59
RPAIN-202ENST00000381208 ARPC4-TTLL3A0A0A6YYG9 625 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 PRORSD1PA6NEY8 169 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 VSTM5A8MXK1 200 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 AIM2O14862 343 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 FZD7O75084 574 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 PDE5AO76074 875 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 CRYAAP02489 173 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 LOXL1Q08397 574 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-202ENST00000381208 SPOCK1Q08629 439 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 BNIP2Q12982 314 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 TBRG1Q3YBR2 411 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 RPS26P11Q5JNZ5 115 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-202ENST00000381208 LRIF1Q5T3J3 769 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 GCNT6Q5T4J0 391 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 FAM69AQ5T7M9 428 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 REEP3Q6NUK4 255 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 NIPAL3Q6P499 406 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 ANKRD16Q6P6B7 361 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 DHRS4L2Q6PKH6 230 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 B3GLCTQ6Y288 498 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 CCDC36Q8IYA8 594 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 MAPK1IP1LQ8NDC0 245 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 OR1K1Q8NGR3 316 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 OR6S1Q8NH40 331 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 PROX1Q92786 737 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 SLC38A4Q969I6 547 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 SLC38A2Q96QD8 506 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 ZNF607Q96SK3 696 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 C1QTNF6Q9BXI9 259 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 CHST2Q9Y4C5 530 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 FKBP7Q9Y680 259 aa11.35□□□□□ -0.59
RPAIN-202ENST00000381208 COL6A5A8TX70 2615 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 LOC102725191A0A1B0GVB3 256 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 A8MV72 311 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-202ENST00000381208 KIAA1324LA8MWY0 1029 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-202ENST00000381208 EVPLLA8MZ36 301 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 FTCDNL1E5RQL4 147 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 RPL36A-HNRNPH2H7BZ11 118 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 ARAFP10398 606 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 PRG2P13727 222 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 CDH2P19022 906 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-202ENST00000381208 SELENOPP49908 381 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 NCALDP61601 193 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 C1DQ13901 141 aaKnown RBP11.34□□□□□ -0.59
RPAIN-202ENST00000381208 TUSC1Q2TAM9 212 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 FAM91A1Q658Y4 838 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 PODNL1Q6PEZ8 512 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 SLC2A7Q6PXP3 512 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 HIPK1Q86Z02 1210 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 EPHX4Q8IUS5 362 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 ADPRHL1Q8NDY3 354 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 OR4F15Q8NGB8 312 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 FAM168AQ92567 244 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 SPDL1Q96EA4 605 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 OXGR1Q96P68 337 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 TNFRSF13CQ96RJ3 184 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 EPYCQ99645 322 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 RABEP2Q9H5N1 569 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 TMEM38AQ9H6F2 299 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 MYOZ1Q9NP98 299 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-202ENST00000381208 YAE1D1Q9NRH1 226 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 CRNNQ9UBG3 495 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-202ENST00000381208 TESQ9UGI8 421 aaKnown RBP11.34□□□□□ -0.59
RPAIN-202ENST00000381208 SLC13A4Q9UKG4 626 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 CORINQ9Y5Q5 1042 aa11.34□□□□□ -0.59
RPAIN-202ENST00000381208 CHD3Q12873 2000 aaKnown RBP11.33□□□□□ -0.6
RPAIN-202ENST00000381208 TRAV36DV7A0A075B6V5 113 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 IGHV4-30-2A0A087WSY4 118 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 B9A039 149 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 ATP6V1G2-DDX39BF2Z307 99 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 NDUFS8O00217 210 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 SLC43A1O75387 559 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 SERPINB7O75635 380 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 LGI1O95970 557 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 F12P00748 615 aaPredicted RBP11.33□□□□□ -0.6
RPAIN-202ENST00000381208 VIMP08670 466 aaKnown RBP11.33□□□□□ -0.6
RPAIN-202ENST00000381208 HOXB9P17482 250 aaPredicted RBP11.33□□□□□ -0.6
RPAIN-202ENST00000381208 PTNP21246 168 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 SLC6A2P23975 617 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 ATP4BP51164 291 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 SNRPD2P62316 118 aaKnown RBP11.33□□□□□ -0.6
RPAIN-202ENST00000381208 VLDLRP98155 873 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 SLC25A3Q00325 362 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 CDK6Q00534 326 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 HIKESHIQ53FT3 197 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 ULK3Q6PHR2 472 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 PIK3C3Q8NEB9 887 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 IL17RDQ8NFM7 739 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 SPATA3Q8NHX4 192 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 STON2Q8WXE9 905 aa11.33□□□□□ -0.6
RPAIN-202ENST00000381208 BCL2L2Q92843 193 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms