RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 NPIPB7O75200 414 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 MRPL33O75394 65 aaKnown RBP8.18□□□□□ -1.1
HMGN1-202ENST00000380747 GMNNO75496 209 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 ADAP00813 363 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 SERPINA1P01009 418 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 IGHV3-9P01782 118 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 EPXP11678 715 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 TCN1P20061 433 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-202ENST00000380747 EDNRAP25101 427 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 UGT2B10P36537 528 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 OR1E2P47887 323 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 OR3A2P47893 321 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 ART1P52961 327 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 SLC16A1P53985 500 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 TAS2R41P59536 307 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 H3F3AP84243 136 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 SLC25A3Q00325 362 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 IL1RL1Q01638 556 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 KRT72Q14CN4 511 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 FAM69AQ5T7M9 428 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 C5orf46Q6UWT4 87 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 C16orf89Q6UX73 402 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 CASP12Q6UXS9 341 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 STAC2Q6ZMT1 411 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 C1orf229Q6ZS94 237 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-202ENST00000380747 GPAT4Q86UL3 456 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 CXorf67Q86X51 503 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-202ENST00000380747 UBE2J2Q8N2K1 259 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 OR9K2Q8NGE7 335 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 MFSD8Q8NHS3 518 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 BCAS4Q8TDM0 211 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 ADAMTS16Q8TE57 1224 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 LZICQ8WZA0 190 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 TAAR8Q969N4 342 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 APH1AQ96BI3 265 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 SLC41A3Q96GZ6 507 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 ZC3HAV1LQ96H79 300 aaKnown RBP8.18□□□□□ -1.1
HMGN1-202ENST00000380747 NSL1Q96IY1 281 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 DACH2Q96NX9 599 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 WFIKKN1Q96NZ8 548 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 EPYCQ99645 322 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 MED18Q9BUE0 208 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 PTDSS2Q9BVG9 487 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 ABCD2Q9UBJ2 740 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 SLC7A7Q9UM01 511 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 TESMINQ9Y4I5 508 aa8.18□□□□□ -1.1
HMGN1-202ENST00000380747 STAB1Q9NY15 2570 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 MED12LQ86YW9 2145 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 AKAP6Q13023 2319 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 A6NNC1 897 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 FTCDNL1E5RQL4 147 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 KPNA4O00629 521 aaPredicted RBP8.17□□□□□ -1.1
HMGN1-202ENST00000380747 LYPD3O95274 346 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 THY1P04216 161 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 GGT1P19440 569 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 IL32P24001 234 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 GRPRP30550 384 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 CCKARP32238 428 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 YAP1P46937 504 aaKnown RBP8.17□□□□□ -1.1
HMGN1-202ENST00000380747 PCYT1AP49585 367 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 MNAT1P51948 309 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 SELENOWP63302 87 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 SLC17A1Q14916 467 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 POU4F3Q15319 338 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 TSC22D1Q15714 1073 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 IFI44LQ53G44 452 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 SAMD4BQ5PRF9 694 aaKnown RBP8.17□□□□□ -1.1
HMGN1-202ENST00000380747 GLYATQ6IB77 296 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 TTC33Q6PID6 262 aaPredicted RBP8.17□□□□□ -1.1
HMGN1-202ENST00000380747 WDR88Q6ZMY6 472 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 FKBP9P1Q75LS8 142 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 AAED1Q7RTV5 226 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 VTCN1Q7Z7D3 282 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 TSPYL5Q86VY4 417 aaPredicted RBP8.17□□□□□ -1.1
HMGN1-202ENST00000380747 DEFB107AQ8IZN7 70 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 PGAM4Q8N0Y7 254 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 KDM8Q8N371 416 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 FAM156AQ8NDB6 213 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 MPP4Q96JB8 637 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 CDRT15Q96T59 188 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 FOXC2Q99958 501 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 TMEM43Q9BTV4 400 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 SF3B5Q9BWJ5 86 aaKnown RBP8.17□□□□□ -1.1
HMGN1-202ENST00000380747 ACTR6Q9GZN1 396 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 PCDHAC1Q9H158 963 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 NDE1Q9NXR1 346 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 SEC14L4Q9UDX3 406 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 RASD1Q9Y272 281 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 GPR52Q9Y2T5 361 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 FLVCR1Q9Y5Y0 555 aa8.17□□□□□ -1.1
HMGN1-202ENST00000380747 PRRC2AP48634 2157 aaKnown RBP8.17□□□□□ -1.1
HMGN1-202ENST00000380747 A0A096LPE4 126 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 A0A1W2PPZ6 126 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 B2RBV5 119 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 LRRN3E7EW58 273 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 M0R082 166 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 CTAG2O75638 210 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 VAMP5O95183 116 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 OR5F1O95221 314 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms