RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 GTF2H4Q92759 462 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 KTI12Q96EK9 354 aaPredicted RBP14.67□□□□□ -0.06
SMN2-201ENST00000380741 ZNF317Q96PQ6 595 aaPredicted RBP14.67□□□□□ -0.06
SMN2-201ENST00000380741 BEX2Q9BXY8 128 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 LINC00470Q9BZP3 86 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 PAIP1Q9H074 479 aaKnown RBP14.67□□□□□ -0.06
SMN2-201ENST00000380741 SEC61A2Q9H9S3 476 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 A4GALTQ9NPC4 353 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 TMEM160Q9NX00 188 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 NKIRAS1Q9NYS0 192 aa14.67□□□□□ -0.06
SMN2-201ENST00000380741 CRNNQ9UBG3 495 aaPredicted RBP14.67□□□□□ -0.06
SMN2-201ENST00000380741 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.66□□□□□ -0.06
SMN2-201ENST00000380741 VWC2LB2RUY7 222 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 CLIC1O00299 241 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 ZNF432O94892 652 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 CECR9P0C854 216 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 BMP2P12643 396 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 ZNF43P17038 809 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 HOXB9P17482 250 aaPredicted RBP14.66□□□□□ -0.06
SMN2-201ENST00000380741 PAX7P23759 505 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 GTF2E2P29084 291 aaKnown RBP14.66□□□□□ -0.06
SMN2-201ENST00000380741 PDLIM4P50479 330 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 CLDN17P56750 224 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 LSM11P83369 360 aaKnown RBP eCLIP14.66□□□□□ -0.06
SMN2-201ENST00000380741 ROR2Q01974 943 aaKnown RBP14.66□□□□□ -0.06
SMN2-201ENST00000380741 NAAAQ02083 359 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 FADDQ13158 208 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 GGTLC2Q14390 218 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 ANKRD16Q6P6B7 361 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 SLC2A7Q6PXP3 512 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 ANKS4BQ8N8V4 417 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 BBS10Q8TAM1 723 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 MAGEE2Q8TD90 523 aaPredicted RBP14.66□□□□□ -0.06
SMN2-201ENST00000380741 TMEM158Q8WZ71 300 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 SLC35B4Q969S0 331 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 RSPO3Q9BXY4 272 aaPredicted RBP14.66□□□□□ -0.06
SMN2-201ENST00000380741 B3GAT1Q9P2W7 334 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 RCE1Q9Y256 329 aa14.66□□□□□ -0.06
SMN2-201ENST00000380741 NDUFS8O00217 210 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 PHF1O43189 567 aaPredicted RBP14.65□□□□□ -0.06
SMN2-201ENST00000380741 FZD7O75084 574 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 IGLV1-44P01699 117 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 OR4A8P0C604 315 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 CALCRP30988 508 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 SH3BGRP55822 239 aaPredicted RBP14.65□□□□□ -0.06
SMN2-201ENST00000380741 ADIPOQQ15848 244 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 C3orf36Q3SXR2 165 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 VHLLQ6RSH7 139 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 C6orf89Q6UWU4 347 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 SLC46A3Q7Z3Q1 461 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 MYPOPQ86VE0 399 aaPredicted RBP14.65□□□□□ -0.06
SMN2-201ENST00000380741 VRK1Q99986 396 aaPredicted RBP14.65□□□□□ -0.06
SMN2-201ENST00000380741 PIMREGQ9BSJ6 248 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 RAD21L1Q9H4I0 556 aa14.65□□□□□ -0.06
SMN2-201ENST00000380741 B9A039 149 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 C5orf58C9J3I9 102 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 RPL36A-HNRNPH2H7BZ11 118 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 M0R082 166 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 PDE5AO76074 875 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 IGKV3-15P01624 115 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 CELA3BP08861 270 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 HTR2AP28223 471 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 NR4A2P43354 598 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 GZMKP49863 264 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 ARF1P84077 181 aaKnown RBP14.64□□□□□ -0.07
SMN2-201ENST00000380741 EFNB3Q15768 340 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 CARTPTQ16568 116 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 COMTD1Q86VU5 262 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 ARIH2OSQ8N7S6 290 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 ZNF417Q8TAU3 575 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 TAAR8Q969N4 342 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 TLCD1Q96CP7 247 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 OXGR1Q96P68 337 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 ZNF587Q96SQ5 575 aaPredicted RBP14.64□□□□□ -0.07
SMN2-201ENST00000380741 PRR14Q9BWN1 585 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 SHARPINQ9H0F6 387 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 PLK3Q9H4B4 646 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 C12orf10Q9HB07 376 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 SLC25A37Q9NYZ2 338 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 RPS6KB2Q9UBS0 482 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 LPAR3Q9UBY5 353 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 USH1CQ9Y6N9 552 aa14.64□□□□□ -0.07
SMN2-201ENST00000380741 IGKV1D-42A0A075B6H8 117 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 IGHV4-61A0A0C4DH41 118 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 A0A1B0GWA3 101 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 LOC390937A0A1W2PQ73 354 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 ZNF503-AS2A6NEH8 195 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 AIM2O14862 343 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 ZNF500O60304 480 aaPredicted RBP14.63□□□□□ -0.07
SMN2-201ENST00000380741 LMX1BO60663 402 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 SLC43A1O75387 559 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 HOXB1P14653 301 aaPredicted RBP14.63□□□□□ -0.07
SMN2-201ENST00000380741 ETS2P15036 469 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 IGFBP5P24593 272 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 GRPRP30550 384 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 PRKAR1BP31321 381 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 FAM69AQ5T7M9 428 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 EPGNQ6UW88 154 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 MSRB3Q8IXL7 192 aa14.63□□□□□ -0.07
SMN2-201ENST00000380741 C10orf111Q8N326 155 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms