RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PCBP4P57723 403 aaKnown RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 YBEYP58557 167 aaPredicted RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 SRSF11Q05519 484 aaKnown RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 JOSD1Q15040 202 aaPredicted RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 LINC00303Q3SY05 128 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 UBXN11Q5T124 520 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 RNLSQ5VYX0 342 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 ESPNLQ6ZVH7 1005 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 LHFPL4Q7Z7J7 247 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF573Q86YE8 665 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 IZUMO1Q8IYV9 350 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 NPY6RQ99463 290 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 GPR21Q99679 349 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 SELENOIQ9C0D9 397 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 PTGFRNQ9P2B2 879 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 NPEPPSL1A6NEC2 478 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 DVL2O14641 736 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 TLR5O60602 858 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 IL18BPO95998 194 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 ADAP00813 363 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 CD79AP11912 226 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 SNRPGP62308 76 aaKnown RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 HEPACAMQ14CZ8 416 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 BATFQ16520 125 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 KIAA0930Q6ICG6 404 aaPredicted RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 FAAP20Q6NZ36 180 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 DHRS11Q6UWP2 260 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 CILP2Q8IUL8 1156 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 C11orf42Q8N5U0 333 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 WFDC12Q8WWY7 111 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 DPH2Q9BQC3 489 aaPredicted RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 RGCCQ9H4X1 137 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 BRF2Q9HAW0 419 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 TCFL5Q9UL49 500 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 PCDHB11Q9Y5F2 797 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 TIMM10BQ9Y5J6 103 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 KPTNQ9Y664 436 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 CASP8AP2Q9UKL3 1982 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 CHD3Q12873 2000 aaKnown RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 PGRMC2O15173 223 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 MAGEB4O15481 346 aaPredicted RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 OR2F2O95006 317 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 IGHA2P01877 340 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 GZMBP10144 247 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 IRF2P14316 349 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 TYMPP19971 482 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 HTR2CP28335 458 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 PTTG1IPP53801 180 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 SLC37A1P57057 533 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 OR2F1Q13607 317 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF234Q14588 700 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 HERPUD1Q15011 391 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 LRRC37A5PQ49AS3 106 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 CXorf57Q6NSI4 855 aaKnown RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF529Q6P280 563 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 PAQR3Q6TCH7 311 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 GAREM2Q75VX8 874 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 PIGXQ8TBF5 258 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 SOCS4Q8WXH5 440 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 TFGQ92734 400 aaPredicted RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 CORO2AQ92828 525 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 TAAR8Q969N4 342 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 SGCZQ96LD1 299 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 CDC6Q99741 560 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 TRMT61BQ9BVS5 477 aaKnown RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 OR2AG1Q9H205 316 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF282Q9UDV7 671 aaPredicted RBP8.63□□□□□ -1.03
PTPRA-204ENST00000380393 SUSD2Q9UGT4 822 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 DKKL1Q9UK85 242 aa8.63□□□□□ -1.03
PTPRA-204ENST00000380393 FAM171A2A8MVW0 826 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 H3BN98 237 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 B3GALT4O96024 378 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 SELEP16581 610 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 DLSTP36957 453 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 CCR8P51685 355 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF697Q5TEC3 545 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 PRAMEF8Q5VWM4 474 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 PRAMEF7Q5VXH5 474 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 CEACAM20Q6UY09 585 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 BEST3Q8N1M1 668 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ARIH2OSQ8N7S6 290 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 C12orf76Q8N812 135 aaPredicted RBP8.62□□□□□ -1.03
PTPRA-204ENST00000380393 OR52N4Q8NGI2 321 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 KCTD12Q96CX2 325 aaKnown RBP8.62□□□□□ -1.03
PTPRA-204ENST00000380393 SLC41A3Q96GZ6 507 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 FOXJ2Q9P0K8 574 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 MMP24Q9Y5R2 645 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 TRAV14DV4A0A0A6YYC5 116 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 RPL36A-HNRNPH2H7BZ11 118 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 HIST1H2BKO60814 126 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 HIST1H2BJP06899 126 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 TBC1D3HP0C7X1 549 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 CYBAP13498 195 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 AKR1A1P14550 325 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 HIST1H2BOP23527 126 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 DTYMKP23919 212 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 HIST1H2BBP33778 126 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 OR1E2P47887 323 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 HIST1H2BDP58876 126 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms