RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CMTM7Q96FZ5 175 aa6.89□□□□□ -1.31
CDKL5-201ENST00000379989 P2RY12Q9H244 342 aa6.89□□□□□ -1.31
CDKL5-201ENST00000379989 GAL3ST2Q9H3Q3 398 aa6.89□□□□□ -1.31
CDKL5-201ENST00000379989 MAP4K5Q9Y4K4 846 aa6.89□□□□□ -1.31
CDKL5-201ENST00000379989 NUP210Q8TEM1 1887 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-201ENST00000379989 TBC1D3DA0A087WVF3 549 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TBC1D3IA0A087WXS9 549 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TBC1D3EA0A087X179 549 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TBC1D3KA0A087X1G2 549 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 A0A0G2JK05 382 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TBC1D3FA6NER0 549 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TBC1D3LB9A6J9 549 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 HSBP1L1C9JCN9 74 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 RGS14O43566 566 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 PCDH7O60245 1069 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TBL1XO60907 577 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 GJB5O95377 273 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TBX18O95935 607 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 KLKB1P03952 638 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 SOD3P08294 240 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 OSMP13725 252 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 KIR3DL1P43629 444 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 GSK3AP49840 483 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 MAXP61244 160 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 ARF5P84085 180 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 SHC2P98077 582 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 MST1LQ2TV78 715 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 C18orf21Q32NC0 220 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 SLC25A35Q3KQZ1 300 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 PDZD11Q5EBL8 140 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TBC1D3CQ6IPX1 549 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 IZUMO1Q8IYV9 350 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TBC1D3Q8IZP1 549 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 GTPBP8Q8N3Z3 284 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 SORCS1Q8WY21 1168 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF582Q96NG8 517 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 KLHL5Q96PQ7 755 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 SLC6A16Q9GZN6 736 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 PARD6AQ9NPB6 346 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TMEM100Q9NV29 134 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 ASIC5Q9NY37 505 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TVP23BQ9NYZ1 205 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 RHCGQ9UBD6 479 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 OR14J1Q9UGF5 321 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 SH3BGRL2Q9UJC5 107 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 SLC27A6Q9Y2P4 619 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TIMM10BQ9Y5J6 103 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 OR2AT4A6NND4 320 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 EFSO43281 561 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 HCRTR2O43614 444 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 HYAL3O43820 417 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 PCDH8O95206 1070 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 IL18BPO95998 194 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TRBC1P01850 177 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 MPC1LP0DKB6 136 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 S1PR1P21453 382 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 MPZP25189 248 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 IL2RGP31785 369 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 HMGA2P52926 109 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TEAD2Q15562 447 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 HYAL4Q2M3T9 481 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 NKAIN2Q5VXU1 208 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 CDC73Q6P1J9 531 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 IL34Q6ZMJ4 242 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TMEM150AQ86TG1 271 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 NRSN1Q8IZ57 195 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 HIST3H2BBQ8N257 126 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 IQCF1Q8N6M8 205 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 OR2AP1Q8NGE2 309 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 OR4D9Q8NGE8 314 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 LMLNQ96KR4 655 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 COPS8Q99627 209 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 SPON2Q9BUD6 331 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 OR51V1Q9H2C8 321 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 UBQLN3Q9H347 655 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 RHOFQ9HBH0 211 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 FGF20Q9NP95 211 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 FBXL4Q9UKA2 621 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 NPFFR2Q9Y5X5 522 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 UBE2QL1A1L167 161 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 C7orf77A4D0Y5 90 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 C9JQL5 133 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 H3BN98 237 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 FGBP02675 491 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 SNRNP70P08621 437 aaKnown RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TACR3P29371 465 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 ADH7P40394 386 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 DIO1P49895 249 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 PNLIPRP1P54315 467 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 CCL23P55773 120 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 RPS14P62263 151 aaKnown RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF345Q14585 488 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 NDUFA9Q16795 377 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 IFI44LQ53G44 452 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 AWAT1Q58HT5 328 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 ARSJQ5FYB0 599 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 FAM27D1Q5T7N8 215 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 FBXW9Q5XUX1 488 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 PTRHD1Q6GMV3 140 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms