RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PTTG1O95997 202 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 PEBP1P30086 187 aaKnown RBP13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 TGFBR2P37173 567 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 FRKP42685 505 aaPredicted RBP13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 CSNK1A1P48729 337 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 CSNK2A1P68400 391 aaPredicted RBP13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 E2F1Q01094 437 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 COL28A1Q2UY09 1125 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 SCGB2B2Q4G0G5 96 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 ZNF782Q6ZMW2 699 aaPredicted RBP13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 GRINAQ7Z429 371 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 ESX1Q8N693 406 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 OR13C3Q8NGS6 347 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 FUZQ9BT04 418 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 SLC25A18Q9H1K4 315 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 CDCP1Q9H5V8 836 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 FBXO34Q9NWN3 711 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 MRPL15Q9P015 296 aaKnown RBP13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 KLK4Q9Y5K2 254 aa13.02□□□□□ -0.32
SHROOM1-203ENST00000378679 DCDC2BA2VCK2 349 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 OR7A10O76100 309 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 IGHEP01854 428 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 JUNBP17275 347 aaPredicted RBP13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 HNRNPFP52597 415 aaKnown RBP13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 OCLNQ16625 522 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 VASH1Q7L8A9 365 aaPredicted RBP13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 SIRT6Q8N6T7 355 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF350Q9GZX5 532 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 PLSCR3Q9NRY6 295 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 NKX2-2O95096 273 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 POU3F2P20265 443 aaPredicted RBP13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 RBM34P42696 430 aaKnown RBP13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 GP2P55259 537 aaKnown RBP13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 PCBP3P57721 371 aaKnown RBP13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 SLC26A5P58743 744 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 BCL2L15Q5TBC7 163 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 C1orf140Q5VVS0 124 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 KIRREL2Q6UWL6 708 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 LRRN1Q6UXK5 716 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 MORN4Q8NDC4 146 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 ATG5Q9H1Y0 275 aa13.02□□□□□ -0.33
SHROOM1-203ENST00000378679 LOC100509620A0A075B734 347 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 PLATP00750 562 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 C1QCP02747 245 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 OR2T7P0C7T2 308 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 MPLP40238 635 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 MAP2K3P46734 347 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 MELKQ14680 651 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 SLC22A18ASQ8N1D0 253 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 OR2T27Q8NH04 317 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 TEAD3Q99594 435 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 NUDT9Q9BW91 350 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 ELOVL3Q9HB03 270 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 PLEK2Q9NYT0 353 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 ZSWIM8A7E2V4 1837 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 IGKV1-8A0A0C4DH67 115 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 SYT7O43581 403 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 IGHG1P01857 330 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 SCG5P05408 212 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 CT62P0C5K7 136 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 TNFSF8P32971 234 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 EMDP50402 254 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 P2RX1P51575 399 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 SELENBP1Q13228 472 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 CAMK2DQ13557 499 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 FAM189A2Q15884 450 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 LANCL3Q6ZV70 420 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 SETD6Q8TBK2 473 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 TRMT10AQ8TBZ6 339 aaKnown RBP13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 FAM71F1Q96KD3 344 aaPredicted RBP13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF160Q9HCG1 818 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 ACAD8Q9UKU7 415 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 GPR55Q9Y2T6 319 aaPredicted RBP13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 LRRTM2O43300 516 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 RBBP9O75884 186 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 GABARAPO95166 117 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 C4orf46Q504U0 113 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 C5orf46Q6UWT4 87 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 LYSMD2Q8IV50 215 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 ZSCAN1Q8NBB4 408 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 GHSRQ92847 366 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 LMF1Q96S06 567 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 OR11A1Q9GZK7 315 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 VN1R1Q9GZP7 353 aa13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 BOKQ9UMX3 212 aaPredicted RBP13.01□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF878C9JN71 531 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 STARP49675 285 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 SNTB2Q13425 540 aaKnown RBP13□□□□□ -0.33
SHROOM1-203ENST00000378679 EXT1Q16394 746 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF628Q5EBL2 1059 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 CNIH2Q6PI25 160 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 OR5J2Q8NH18 312 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 SLC41A2Q96JW4 573 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 ARHGAP9Q9BRR9 750 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF226Q9NYT6 803 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 CSO75390 466 aaKnown RBP13□□□□□ -0.33
SHROOM1-203ENST00000378679 APOC1P02654 83 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 DRD5P21918 477 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms